LOC120562397


Basic Information

Item Value
gene id LOC120562397
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 41147864 ~ 41150002 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806123.1
ACGTCTGAACCTGTAGCTGAATGTTTGCCGTATATGGAGATGATATCGAGCTGTTTGTTTCAGAGACAACCCCTCTCTCGGAGGATATAAGACTGAGaaattatttaatttctctGTCTGAACATTCTTCAGATTTGCATCGTGTCAGAGTTCTgctcttcatcttcatcttcagaCTTTGCAGTTTAGATTTTACATTTCTATATTTTTGGACCTTTGTACCTGAAACTTTCTCCACCAAGTCTTCGATCAACATGAAGATCTCTATCTTTGCTGGTGTTCTGCTGATCTCTGCTGCCGTGCTCTCTGTGGACGGACAAAGTTGGGCTGAGTTTCAAAATAAGCATATCAAAGAGTGGATGACTGCTGGCCAATGTACCCAGGTGATGAGAGCCAAAAGAATTGTGAACCCACCCACACAAGTGAACCCAAGAATCAGCTGCAAGACTTTCAATACCTTCATCATCACCGAGGATGTGAACGCCGTCCGAGCCATCTGTGGTAGAGGAGGAGCGCCATATGGCAACAGTATGAGAATTAGCACAGCTACTTTCCCAATTGTTGACTGTAACCTGGTGAATCAGAATCCACCTGCTGTTCCCTACAACTGTCGGTACAACGGAGTACCTCGTTACAACAGAAGAATTATAGTCAGATGTGAGAACGGAGAACCTGTTCACTTTCATAGAAGtcagtaatctgttactacttgatgaatcagagtaatctgttactacctgatgtatcagagtaatctattactacttgatgaatcagagtaatctgttactacctga

Function

GO: NA

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05133 Pertussis
ko05150 Staphylococcus aureus infection
ko05322 Systemic lupus erythematosus

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806123.1 True 797 mRNA 0.42 2 41147864 41150002

Neighbor

gene id symbol gene type direction distance location
LOC120562401 NA coding upstream 44081 41102048 ~ 41103783 (+)
LOC120562402 NA coding upstream 240028 40907328 ~ 40907836 (+)
LOC120562405 NA coding upstream 310786 40830512 ~ 40837078 (+)
LOC120562500 NA coding upstream 487550 40655512 ~ 40660314 (+)
LOC120562386 NA coding upstream 598449 40510050 ~ 40549415 (+)
LOC120562391 NA coding downstream 13741 41163743 ~ 41174846 (+)
LOC120562388 NA coding downstream 70082 41220084 ~ 41294381 (+)
LOC120562390 NA coding downstream 89081 41239083 ~ 41319704 (+)
LOC120562404 NA coding downstream 350183 41500185 ~ 41501659 (+)
LOC120562396 NA coding downstream 391088 41541090 ~ 41545594 (+)
LOC120562412 NA non-coding upstream 11690 41135950 ~ 41136174 (+)
G80265 NA non-coding upstream 40138 41068184 ~ 41107726 (+)
LOC120562408 NA non-coding upstream 55950 41091477 ~ 41091914 (+)
G80280 LOC100709493,LOC102203400,LOC102799186,LOC102289534,LOC101466554,LOC103358480 non-coding upstream 102472 41044777 ~ 41045392 (+)
LOC120562417 NA non-coding upstream 166237 40979110 ~ 40981627 (+)
G80299 NA non-coding downstream 65519 41215521 ~ 41598153 (+)
G80306 NA non-coding downstream 163709 41313711 ~ 41347897 (+)
G80318 NA non-coding downstream 198580 41348582 ~ 41402166 (+)
G80321 txnip,LOC102791564,LOC102307684,LOC101475238,LOC102207340 non-coding downstream 210457 41360459 ~ 41362553 (+)
G80322 NA non-coding downstream 212677 41362679 ~ 41363468 (+)
LOC120562400 NA other upstream 135245 41007967 ~ 41012619 (+)
LOC120562387 NA other upstream 491297 40645659 ~ 40656567 (+)
LOC120562499 LOC103374404 other upstream 706548 40378682 ~ 40441316 (+)
LOC120562498 LOC103369894 other upstream 802804 40290982 ~ 40345060 (+)
polr3glb NA other downstream 6472 41156474 ~ 41186945 (+)
G80320 NA other downstream 206478 41356480 ~ 41360206 (+)
LOC120562389 NA other downstream 227445 41377447 ~ 41393226 (+)
G80337 NA other downstream 271354 41421356 ~ 41456358 (+)
LOC120561589 NA other downstream 532411 41682413 ~ 41693005 (+)

Expression


Co-expression Network