LOC120562761 (LOC104963449)


Basic Information

Item Value
gene id LOC120562761
gene name LOC104963449
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 42787709 ~ 42800596 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806649.1
AGCTCTTCCTACCTGCTTCCTCAAGGTGTGTCTGTCATTCATAACAGAAAACCAGTTACCTTTCTCTCCAGGCGTCGAGTCAACACTGGACGGTTTAAAGAAACTCTATATAGGAGGCTGGAACAAAGGCCAAGGATGACATCCACGGCAGATCGGCTGGCCCGTCAGCAGGACAGGGAACGAGGCATTGGCACAGACAAGAAAGCAGTGAAGTTCTCCCAGCAAGATTATGAGACTCTGCGCAAGCAGTGTTTGAAGAGTGGACGCCTGTTTGAGGACAACTGCTTTCCAGCTGAGCCCACATCACTGGGCTACAAGGAACTGGGACCATGCTCATCCAAAACCAAGGGGGTTGTTTGGAAAAGGCCAAAGGAGCTGTGCTCAAACCCAAAGTTCATTGATGATGGAGCCACCAGGATGGACATTTGCCAAGGATCTCTGGGTGACTGCTGGCTTCTGGCTGCAATTGCCAGTCTGACTCTAGACCAGCAGATCCTGGCTCGTGTAGTGCCCCAGGAACAAAGTTTTACTGAAGGTTACGCCGGGATATTTCACTTCCAGATCTGGCAGTTTGGTGAGTGGGTGGATGTGGTGATCGATGACCGTTTACCCACAAGAAATGGAAAGCTGCTGTTTGTTCACTCAGCGGTGGGCTCAGAGTTTTGGAGCGCGCTGCTGGAGAAGGCctacgccaaGTTGTATGGCAGCTATGAGGCCCTGAAAGGAGGAAACACTACTGAGGGCTTTGTGGATTTCACAGGAGGGATTGCAGAAGTATACTACTTAGACAAAGCTCCGCCGACGCTCTTCCAAATCATGCAGAAGGCCCTAAGGCTGGGTTCACTGCTGGGTTGCTCTATTAATAAAAAGACCAATGCCGAGACAGAGGCAGTTACACCTCTCAATCTTTTCAAGGGACATGCATACTCAGTCACTGGTGCAGAGGAGGTTCATTTCCAAGGTGAGCCGGTTCAGCTGCTTCGCATCAGGAACCCATGGGGTAACAAGGAGTGGACTGGGCCTTGGAGTGATGGGTCCAGTGAATGGAACAATGTCAGCAAAGATGAGAAATCAAAGTTGAACCATGCGGCTGACGATGGAGAATTCTGGATGTCCTATTCAGACTTTATCAAGCAGTTCTCCAGGCTGGAGATCTGTAACTTGACCCCAGACGCGCTCATGAGTGATGATGTGGCCCACTGGAAGCATTACCAGTTTGAAGGGACATGGAGGGTGGGCTCTACTGCAGGGGGCTGCAGCAATTTCTCAGCCACATTCTCGTCCAACCCTCAGTTTGTGGTGCGCCTGGAGGATGTGGATGATGATCCCCTGGATGGGAAGGATGGATGTACCATTCTGGTTGGGCTCATGCAAAAGGATGGACGACAGCAGAAGAGGCTCGGCCGCAACCTTGAGAGCATTGGCTTTGCCATTTATAAGGTCCCAGACCAGTACAAAGGCCAAAGCAATCTTCACCTGGGTCCAGATGTCCTGCTGCGACAGAGACCTGTGGCCAAGTGCTCCTTCGTCCCTACACGGGAAGTGTGCAAGCGCTTTAAACTTCCTCCAGGAGAATATGTCATTGTTCCCTCGACCTATGAGCCTGACAAGAATGGTTGCTTCCTTCTCAGGGTGTTCGCTGAGAAACAGGCTGCTGCCAGAAATGTTTAGGGCTCTGGAGAGAGCTGACACAGGGAAGATTGAGCTGGATATGCAACAGTGGTTTTGCCTGGCCATCTTCTGACTCTGGAGACAAGACAAGCGAGGGCCCTTTTGTAAAACATGCTGGAGGATTAACAATACATTTATTGAattcacaaaaacaaatcatattttTTACAAACTAAGTAAACCCAATGATAGTTCAGATGCACTCCAAATGCTTGAAAATGGCTAAAATGTGTTTGTAAATTTGAATCATATTTGCTGAACATATACATTGGGATATGTTGTGTCGTGGAAGTTTTCTATGAAGCAGCAGAGTAaacaaatatcaatgataaaaatgaaaacgaataaagactgtttgagaattaaa
>XM_039806650.1
GTGTCTGTCATTCATAACAGAAAACCAGTTACCTTTCTCTCCAGGCGTCGAGTCAACACTGGACGGTTTAAAGAAACTGAGGCTGGAACAAAGGCCAAGGATGACATCCACGGCAGATCGGCTGGCCCGTCAGCAGGACAGGGAACGAGGCATTGGCACAGACAAGAAAGCAGTGAAGTTCTCCCAGCAAGATTATGAGACTCTGCGCAAGCAGTGTTTGAAGAGTGGACGCCTGTTTGAGGACAACTGCTTTCCAGCTGAGCCCACATCACTGGGCTACAAGGAACTGGGACCATGCTCATCCAAAACCAAGGGGGTTGTTTGGAAAAGGCCAAAGGAGCTGTGCTCAAACCCAAAGTTCATTGATGATGGAGCCACCAGGATGGACATTTGCCAAGGATCTCTGGGTGACTGCTGGCTTCTGGCTGCAATTGCCAGTCTGACTCTAGACCAGCAGATCCTGGCTCGTGTAGTGCCCCAGGAACAAAGTTTTACTGAAGGTTACGCCGGGATATTTCACTTCCAGATCTGGCAGTTTGGTGAGTGGGTGGATGTGGTGATCGATGACCGTTTACCCACAAGAAATGGAAAGCTGCTGTTTGTTCACTCAGCGGTGGGCTCAGAGTTTTGGAGCGCGCTGCTGGAGAAGGCctacgccaaGTTGTATGGCAGCTATGAGGCCCTGAAAGGAGGAAACACTACTGAGGGCTTTGTGGATTTCACAGGAGGGATTGCAGAAGTATACTACTTAGACAAAGCTCCGCCGACGCTCTTCCAAATCATGCAGAAGGCCCTAAGGCTGGGTTCACTGCTGGGTTGCTCTATTAATAAAAAGACCAATGCCGAGACAGAGGCAGTTACACCTCTCAATCTTTTCAAGGGACATGCATACTCAGTCACTGGTGCAGAGGAGGTTCATTTCCAAGGTGAGCCGGTTCAGCTGCTTCGCATCAGGAACCCATGGGGTAACAAGGAGTGGACTGGGCCTTGGAGTGATGGGTCCAGTGAATGGAACAATGTCAGCAAAGATGAGAAATCAAAGTTGAACCATGCGGCTGACGATGGAGAATTCTGGATGTCCTATTCAGACTTTATCAAGCAGTTCTCCAGGCTGGAGATCTGTAACTTGACCCCAGACGCGCTCATGAGTGATGATGTGGCCCACTGGAAGCATTACCAGTTTGAAGGGACATGGAGGGTGGGCTCTACTGCAGGGGGCTGCAGCAATTTCTCAGCCACATTCTCGTCCAACCCTCAGTTTGTGGTGCGCCTGGAGGATGTGGATGATGATCCCCTGGATGGGAAGGATGGATGTACCATTCTGGTTGGGCTCATGCAAAAGGATGGACGACAGCAGAAGAGGCTCGGCCGCAACCTTGAGAGCATTGGCTTTGCCATTTATAAGGTCCCAGACCAGTACAAAGGCCAAAGCAATCTTCACCTGGGTCCAGATGTCCTGCTGCGACAGAGACCTGTGGCCAAGTGCTCCTTCGTCCCTACACGGGAAGTGTGCAAGCGCTTTAAACTTCCTCCAGGAGAATATGTCATTGTTCCCTCGACCTATGAGCCTGACAAGAATGGTTGCTTCCTTCTCAGGGTGTTCGCTGAGAAACAGGCTGCTGCCAGAAATGTTTAGGGCTCTGGAGAGAGCTGACACAGGGAAGATTGAGCTGGATATGCAACAGTGGTTTTGCCTGGCCATCTTCTGACTCTGGAGACAAGACAAGCGAGGGCCCTTTTGTAAAACATGCTGGAGGATTAACAATACATTTATTGAattcacaaaaacaaatcatattttTTACAAACTAAGTAAACCCAATGATAGTTCAGATGCACTCCAAATGCTTGAAAATGGCTAAAATGTGTTTGTAAATTTGAATCATATTTGCTGAACATATACATTGGGATATGTTGTGTCGTGGAAGTTTTCTATGAAGCAGCAGAGTAaacaaatatcaatgataaaaatgaaaacgaataaagactgtttgagaattaaa

Function

NR:

description
PREDICTED: calpain-2 catalytic subunit-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806649.1 True 2038 mRNA 0.48 15 42787709 42800596
XM_039806650.1 False 2003 mRNA 0.48 15 42787736 42800596

Neighbor

gene id symbol gene type direction distance location
LOC120562762 LOC104963449 coding upstream 19045 42764403 ~ 42768664 (+)
LOC120562768 NA coding upstream 121706 42663518 ~ 42666003 (+)
LOC120562755 NA coding upstream 258227 42527496 ~ 42529482 (+)
LOC120561585 NA coding upstream 937007 41727566 ~ 41850702 (+)
LOC120562406 NA coding upstream 1211206 41551091 ~ 41576503 (+)
LOC120562763 LOC106675675,LOC106675676 coding downstream 25002 42825598 ~ 42831659 (+)
LOC120562760 LOC103358480 coding downstream 106420 42907016 ~ 42912785 (+)
LOC120562780 NA non-coding upstream 7186 42778955 ~ 42780523 (+)
G80713 NA non-coding upstream 16990 42675937 ~ 42770719 (+)
G80719 NA non-coding upstream 29083 42740826 ~ 42758626 (+)
G80717 NA non-coding upstream 44056 42696625 ~ 42743653 (+)
LOC120562769 NA non-coding upstream 66855 42719416 ~ 42720854 (+)
LOC120562781 NA non-coding downstream 41979 42842575 ~ 42845934 (+)
G80732 NA non-coding downstream 50001 42850597 ~ 42955526 (+)
LOC120562773 NA non-coding downstream 55841 42856437 ~ 42863102 (+)
G80737 NA non-coding downstream 75190 42875786 ~ 42876732 (+)
LOC120562779 NA non-coding downstream 86499 42887095 ~ 42888441 (+)
LOC120562772 NA other upstream 1304 42783495 ~ 42786405 (+)
LOC120562767 NA other upstream 143719 42632407 ~ 42643990 (+)
LOC120562757 LOC104947480 other upstream 248108 42532924 ~ 42539601 (+)
G80682 NA other upstream 301700 42485335 ~ 42486009 (+)
G80410 NA other upstream 781115 41939498 ~ 42006594 (+)

Expression


Co-expression Network