G93912


Basic Information

Item Value
gene id G93912
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 7271936 ~ 7287153 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU126703
TGGATATTTACTTTCTACCTGAGTAAGAAAAGCAACGTAAAATAATGTGCTATCCAGTCCTATAAATCTTGAGCTTATCTCCCTTTTAAAAACTCATATTTTTAACATTGGTATAATTTTACCAATTATttagtagggctgtgctcgattaaagaaattcttagtcgactaacactcattcaattgtatcgactaatcgattagttgatttaatcgacagatctgtaaatctgagtttctccgcaaagagtcatgcaaaagcaccactttaattcttgtgtttaccagagatgtgctcgtacgtttctcggaaataagtcattcagcatgaaaaaagcatcaaacatgactaatcgactaaagaaatctaagttgactaagaccaaaacgaccaattagtcgactaatcgactaagagggagcagccctactatTTAGTGCCTGACTCTGACTGActctttcttattttttatttttgggctaAAAATGaagtttgtttttaacaaaTATTTATTGGCATTTAGTTTTTTCAGCACATCAAGACAATTACAGATGTACCTCCCCATCTTTTCTTCGGCGTTATTAAGCCTTGGAGTTTTAGGGAACAGGCCAAGAATACACATCATTGGAAATTCTGTTTGTTTGGCCTAAactatgaaatgaaaaatgtgtcAGAACACATCTTCCCAAATGTCTTTGATCCTTGGGCAATCCCAGAAACAGTGTGCCCTTTTGTAGCATGGCATTTCACACATTGGTCTGGATTATTGGCACTAAAATATGTGTAATAGGGAGGGAGTTAACATAAGCACATACGATCCATTTGTACTGTGAAGTCAGAATGGATTTTTCTGAGTAGCCCTGACATTAAGTGGGTGTGACAATTTTATAGGTGTGCTTAGATTGATTCCATGTGACAAATGAGGAGTCATTACAGCAAAAAGGGCATCTAGGACTGTTGCCCTATAAGTTATTTAAGAATATCAAACCGAGAAAAGCGTCAAAGGTTAAGAAGCTTGCCATTTCGGcttaaaaaatgacaataaaatattgattatcaaaattgtaGCTGATTAACTTTCGGTCGATCTCTTGAACAATTAATCAGCTAATCATTGTAGCTGTATatccccaatttttttttttttttttgTGGCGGCGAGTTTACTTTGCAGcacttgtttgtttttgaaaaaaggcTTTTGGAAGTCAAACAGAACCTGTGCCAACTTCCGAGGATGGGAACAGAAGGAGGTGAGGACAGGGATTGTATTCTTGCCTTTCACCGTGTTCTCCCTCCTTTCTCAACTTGGACTTGATCTTTTCTTGGGGGGGCGTGCTTGTGTTGGCACAGCGTTATTTCACAGATGACATCTCAGTGATGGTTGATCTCATTTTGCCAGAGGAATTCAAATCTCAAAcaacttgttgttgttgtaggcaGCTGAATCTTTAAAGAGTCACTTAAAATCCTAAACAAAATCCTGAAATGTAATAGTAAAAATGAACATATCCTAACACATAACCCATCAATCAACTGAGCAATAATTTCAGATTTTCACCTCATTTGTCAACAATTTCAGAATTTCTCCTCACTCATCTGTTTATGGGCTGCATTCAGGAGCTCAAAACTCAACTTTTCAGACGACAGACCCCCCCCATTTTAAACCAAAGCAACTTGACTTGCTGTGGAAGTCGCAATCTTGGATGCATCCCAGAGTGACTGCTGTTGAGAGTTCAGTAACCCACTGTGTCACTGTGCCTACAGGATTGTTTACAGGGATTTAAAAGTTGCCAAATTAACTTGAGTTTGATACAGAGTAGTATCTTTAGACACAGTAAGATGTTGCCGAACTCTCTGCCAAACTACAAGAAAGTAGACTTTTCcttattttgtatttcattttttattgtcTGAGATGAACCTTTGATGGTAcagaatataaacaaaaaccTGCCACctcacttttttattattatttacagtgCATATTAGGTTCACGAATTGTCAGTTTTGACCATATTAACGGGAGAACTGGTTGATCTGTTGTGTGCGTTATGACTGTGTCCGAGTGTGTATGTACAAGCGTCGGTAATATTACTGTCTCttgtatgttgtaaaaaaaaaaaaaatgttttgagagACAAATGTTCTCAGAATTATGAAAGACTTGTACATAGCGAAGAAAGTAAGCGAgacttttgaaatgtttttatttgtaaagcagaaaaaaaactgcatgtggGTATTAATTTATTGTG

Function

GO: NA

KEGG:

id description
ko05110 Vibrio cholerae infection

RNA

RNA id representative length rna type GC content exon number start site end site
TU126703 True 2262 lncRNA 0.37 2 7271936 7287153

Neighbor

gene id symbol gene type direction distance location
igfbp3 LOC103358919 coding upstream 144664 7108149 ~ 7127272 (+)
si:ch211-191a24.3 LOC103358916 coding upstream 204002 7007170 ~ 7067934 (+)
si:ch211-191a24.4 LOC104966872 coding upstream 300636 6965547 ~ 6971300 (+)
ghrhrb LOC100710271,LOC101475240,LOC103357300 coding upstream 548659 6672071 ~ 6723277 (+)
cyldl NA coding upstream 630816 6627642 ~ 6641120 (+)
LOC120565797 slc22a23,LOC102794535 coding downstream 66695 7353848 ~ 7379344 (+)
LOC120566053 dusp22 coding downstream 110985 7398138 ~ 7413692 (+)
LOC120566212 irf4,LOC104941070 coding downstream 128288 7415441 ~ 7423820 (+)
foxq1b foxq1,LOC104946962 coding downstream 293039 7580192 ~ 7581837 (+)
foxf2b foxf2,LOC102792585 coding downstream 298988 7586141 ~ 7590299 (+)
G93906 NA non-coding upstream 36217 7233146 ~ 7235719 (+)
G93896 LOC102798054,LOC101466326,LOC100702846,LOC102303795,LOC102210503 non-coding upstream 115217 7156335 ~ 7156719 (+)
G93888 LOC104954812,LOC103358918,LOC104927721,LOC102210208 non-coding upstream 137504 7131348 ~ 7134432 (+)
G93851 NA non-coding upstream 141185 7127314 ~ 7130751 (+)
G93834 NA non-coding upstream 278774 6992856 ~ 6993162 (+)
G93931 NA non-coding downstream 31689 7318842 ~ 7321455 (+)
G93932 LOC103399850 non-coding downstream 34913 7322066 ~ 7323426 (+)
G93933 NA non-coding downstream 40018 7327171 ~ 7327686 (+)
LOC120566054 NA non-coding downstream 107220 7394373 ~ 7395278 (+)
G93985 NA non-coding downstream 237837 7524990 ~ 7525343 (+)
rhpn1 rhpn1 other upstream 890338 6354892 ~ 6381598 (+)
G93638 NA other upstream 1057919 6202085 ~ 6214017 (+)
G93613 NA other upstream 1220416 6035369 ~ 6051520 (+)
trmt1l trmt1l other upstream 2558703 4685224 ~ 4713233 (+)
LOC120565391 NA other upstream 2958421 4284755 ~ 4313515 (+)
G93938 NA other downstream 62657 7349810 ~ 7350587 (+)
LOC120565294 pycrl other downstream 591766 7878919 ~ 7890177 (+)
LOC120565614 NA other downstream 608992 7896145 ~ 7905247 (+)
G94073 rgs5,LOC107393027,LOC104951458,LOC100708109,LOC105932873 other downstream 950217 8237370 ~ 8286436 (+)
G94199 LOC103367571,LOC102312400,LOC100710958,LOC101467655 other downstream 1860009 9147162 ~ 9168877 (+)

Expression


Co-expression Network