Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120565927 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053120.1 |
| NCBI id | CM020917.1 |
| chromosome length | 41568296 |
| location | 34220623 ~ 34222131 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU134936 | False | 298 | lncRNA | 0.48 | 3 | 34220662 | 34222122 |
| XR_005640305.1 | True | 346 | lncRNA | 0.48 | 3 | 34220623 | 34222131 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120565538 | cherp | coding | upstream | 127048 | 34066115 ~ 34093575 (+) |
| si:ch211-247n2.1 | LOC102307905,LOC103372256,LOC102782276,LOC101477182,LOC102211467 | coding | upstream | 157048 | 34031890 ~ 34063575 (+) |
| si:ch211-51h4.2 | LOC102206538,LOC102309665,LOC102076398 | coding | upstream | 345527 | 33772446 ~ 33875096 (+) |
| ect2 | ect2,LOC102798372 | coding | upstream | 1809176 | 32221033 ~ 32411447 (+) |
| mcf2l2 | NA | coding | upstream | 2061178 | 31783226 ~ 32159445 (+) |
| LOC120565861 | LOC103354068,LOC104966713 | coding | downstream | 158616 | 34380747 ~ 34384027 (+) |
| LOC120565866 | LOC105938272,LOC105937414,LOC105938273 | coding | downstream | 232250 | 34454381 ~ 34456956 (+) |
| arhgap39 | arhgap39 | coding | downstream | 306437 | 34528568 ~ 34661669 (+) |
| hyi | hyi | coding | downstream | 1245880 | 35468011 ~ 35477553 (+) |
| ddx10 | ddx10 | coding | downstream | 1451229 | 35673360 ~ 35678429 (+) |
| G100043 | NA | non-coding | upstream | 1015877 | 33204180 ~ 33204746 (+) |
| G100028 | NA | non-coding | upstream | 1140782 | 33078937 ~ 33079841 (+) |
| G100013 | NA | non-coding | upstream | 1334474 | 32881680 ~ 32886149 (+) |
| G99994 | NA | non-coding | upstream | 1627438 | 32592939 ~ 32593185 (+) |
| G99907 | NA | non-coding | upstream | 2031816 | 32188408 ~ 32188807 (+) |
| G100148 | NA | non-coding | downstream | 81959 | 34304090 ~ 34304346 (+) |
| G100161 | NA | non-coding | downstream | 228150 | 34450281 ~ 34450515 (+) |
| G100159 | NA | non-coding | downstream | 280433 | 34502564 ~ 34507602 (+) |
| G100199 | lrrc41 | non-coding | downstream | 444351 | 34666482 ~ 34677930 (+) |
| G100215 | NA | non-coding | downstream | 515376 | 34737507 ~ 34793890 (+) |
| G100087 | NA | other | upstream | 342292 | 33875209 ~ 33878331 (+) |
| LOC120566032 | naaladl2,LOC102797677,LOC101487368 | other | upstream | 457704 | 33243213 ~ 33762919 (+) |
| nlgn1 | nlgn1,LOC102797975 | other | upstream | 1341990 | 32436847 ~ 32878633 (+) |
| LOC120565823 | NA | other | upstream | 2453084 | 31761992 ~ 31767539 (+) |
| LOC120564930 | NA | other | upstream | 2577177 | 31613889 ~ 31643446 (+) |
| G100174 | calr3 | other | downstream | 282512 | 34504643 ~ 34507552 (+) |
| dsg2.1 | NA | other | downstream | 1993333 | 36215464 ~ 36234599 (+) |
| G100568 | lmnb2 | other | downstream | 2251407 | 36473538 ~ 36475195 (+) |
| smim24 | NA | other | downstream | 2273353 | 36495484 ~ 36534582 (+) |
| sass6 | sass6,LOC102776185 | other | downstream | 2373910 | 36596041 ~ 36611746 (+) |
