si:ch211-191a24.3 (LOC103358916)


Basic Information

Item Value
gene id si:ch211-191a24.3
gene name LOC103358916
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 7007170 ~ 7067934 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811274.1
TGTTTCTCAGAGAGAGAGTCTCCACCTCGATTTCTATAGACCAGTCAGACTTTCACTCATCAGGCTTCATATTGCTGTGATTTTCTTGTTTACTGCAACATCAGCAAAGGGCGCCCATGTGACCGAGATCAGTCATGGAGGAACCGCAGCGAATCGATCTGACCTACATCACAGAACGCATCATCACCATTTTCTGCCCTTCCGAATGTCCAGAAGAGCTCTACGTGCAGAACCTGGAGGAGATTATTCACATGCTGCAGTCCAAGCATGGACACCACTACATGGTCATCAACCTCTCACAGAAACACGAAACTCTCACCCGAATGAACCACAAGGTTTTGGATACAGGTTGGCTGGATCTCCTGGCCCCTGACCTGGAGCAGATCTTCAGTGTGTGCACGACGATGAAGAACTGGCTGCAAACACATCCAAAGCACGTCCTGGTGCTACACTGCAGGGGAGGTAAAGGCCGGCTCGGAGTTCTGGTGGCTTCTTACATCCACTTCAGCAACATGTCAGCCAGTGCAGACCTTTCTCTGGACCACTTTGCCATGAGGAGGTTCTACAATGACAAACTGTCCGCTCTGATGACCCCGTCGCAGAAACGGTATGTGTGGATGCTGGGGAGCATGTTAAAGGGAGGACTGAGGATGTGTCCCTCTCCGTCTTTCCTCCTGTGTGTTGTTCTTCACGGTCTTCCCAAAATAAGACCAGATGGAGCATGTTGTCTCTTCCTGAGAGTCTACCAGAGTCTACAGCCTGTTTACACATCAGCAGTCTACCACGTTAATGCGGCTCAGACAGACCGCCTCTACATTGTGCTCCAGCCAGCTCAGCTGCTCAAAGGGGACATCATGGTGCTTTGTTATGATAAAAACAGCCGCTCAGCCAGCCGGCAGCTCGTCTTCCGTCTCCAGTTTCATACGGGACTCGTACACGGAAACAGCCTGACCTTCTGTAAGGCGGACCTCGACTGTGCCAGTGAAGATCCCCGGTTCACAGAAGATGGAAAAGTAGAACTGTTGCTTTCTGACAGCCCTGAAAAGATAACAGGCAGAGAGCTGTGGCACAACGGACGCTGTGTGACCGTGGACTATGACACCTTGGACCCTTTGGTTAGAAGAGATTCATATCAAGACACGTCTTCTCTTGAAAAAGCTTCCCCTCATCTCCTGGACCCTGgactgaggaagaagagtagTGAGGAAGGGTCTTCGTTCCGCCTGACCACCAGCAGCCCCAGCCGCAGCGACCGAGCGCCATCTGCCAGCAGTGATTCGGGCCTGTCTGTTGCCTCACAGGGGCGCACCGGAGCCGCGCAGAGGAGAGGGGCTGCACGGGACAAGTATACCCAGGCAGGGAGGCTGCTCTCTGGGCTGGAATTTGAGATTGCTCAGCCGCTTCTGGAGGTCATGACTGAGCTTGCTGCGTCCGGCAGAGGGGAAGGGGAAATGACTGGAGACGAGTCTGGACTGGGACACACTATCAATGGAGAGGCTTCGTCCAGCGAGAGGGAAACGGATATATTAGATGATGAGGATGAAGCAGATGAAGCAGCGCCTGCTTCGGACCTGCCGAGCTCAAGCAGCATCTGCTCCCTCTCCTCTGAGAACCTGCCTGAAGCTCAGACATCAGCCCACGCAGAGTACTCCACACACTCCTGGGTTTGGCAGCAGCAGATGGTTGACGTCGTCGTCACCGATGCCTACCTTGGAGTCGATGGGGAGGAGAGGTTGAACAGGGTGAGGAAACAGCGCCCGCCGCCTCTGGTAGCGCCTGAGACACCACACCGAGGACTCAGCAGCAGGGAAGCAGTGCAGAGAGGGCTGGTGGACGAGGATGCCACGCAAAACACAGATGTTACAAACAGCGTGGACTCTGTCCATACTACGCACGCTTCGTCTTGCCAAGAAGAGGATTTGTCGTCGTTGAATACGGACATCGACGAGTCCATAGAACAGCTGAACCAGCTGATTCTGGATTTGGACCCCACCTTTGTTCCTGTTCCTACCCGCTGTTCCCCCCTGTCCCGCTCCGCCTCCCTACACACCAACGGCCTCAGCAACAACAGAAATACCCGTCAGTCAGGTTGGAGGCAGCAGATGCAGATCAGTGATGTGACCGACTATGCTGGTCTCCAAAGTCCAGGATGGAGGGGGGGTAGCGCTCAGAGCTTCAGAGGCTCCCCAGTCTACAGTCCCCCCTACTCACCAGCTCAGCATGGGCATCTCTACCATCGGGGACAGACAGATAGCTCTGACATTGTCCCTTCTACTCCGGCCTTCCCAGTGACTCCTCCGACGCCCTACATGAAACATTTCTCAGAGTTTTCCGAGCTCAGGACTGGTGGACAGTGGGACCAACACAGCTGGACACAAGATTCCCGGAGTTTCCTGGACAGTATGAACCACGCTGGCAGCTCTGCAGAGGGAGAGCTCTTCAGATCAGAAGTGTCGGCCACTCCTGCTTCCTGTCAGAGGATCTTTGGCTCCATGTGCTCCATGTCATCAGACagccccctcccacacacagacagCTCCACTCCTCCTCCTGTGTGGCACGACCGGACTCCAAACTCCCTGAACTCCCCGTTCCCCCCCCAGCCctcacctcctccctccctcagcACTCCCAATGCCCACAGCTCCCCGCGGGGGGCTCTGAGAGGCCCGGGCAGAGGCCCATGGGTCCGCGGGGAGACAGACAGCGGAGACTTGTCCTCCTTGTTGTTGGGGAACGGCAGCCTGGAGCACAGCCTGCTGGAGGCCATGGAGGGCCTCGGGGGTCTGGACCTCGGGGGAGACGGGCGCCTCCCTCCACTGCTGCCTGAGAAGAGGAGAGTGGGTGAGGGGGGGGAGCTTGGCTCCCGCTCCCCCTCTCTGAGTGGGTTTTCTAGCCCTTACAGCGGCAGCAGTCTCAGCATCCCTTTCTCATCCCCCATGACCCCCGACCCCCTCAGAGGACTCAGTGGGGCCCAGTCGCCCGGAGCAGACTTTGGCAGTAAGCAGGACACTGTGAAGTTTGTTCAGGACACTTCCAAGTTCTGGTACAAGCCCGACATTTCTAGAGACCAAGCCATCGCAGTGCTAAAGGACAAAGAGCCGGGCTGGTTCATCGTCAGAGACAGCCATTCGTTTCGGGGGGCGTATGGATTGGCCATGAAGGTGGCCACACCGCCTCCGTCTGTGTTACAACAGAGTAAGAAAGGGGACCCGTCCAATGAGCTGGTGAGACACTTCCTGATAGAGTGCACACAGAAAGGAGTTCGTCTCAAGGGCTGCCCCAACGAGCCGTACTTTGGAAGTCTCACAGCTCTGGTGTgtcagcactccatcactcctCTGGCTCTGCCCTGTAAACTCATCCTGCCTGACAGAGATCCGGTGGAGGAGCTGACCGACTCGCCTGTACAGACGGCGACAAACTCAGCAGCTGAGCTCCTCAAACAGGGAGCAGCGTGCAACGTGTGGTACCTGGGCTCTGTGGAGCTGGAATCTCTGACGGGACACCAGGCGGTTCAGAAGGCGACCACGATGACGCTCGCCATGGACCCTCCGCCTGCTTCCACCGTCGTCCACTTCAAGGTGTCGGCACAGGGAATCACGCTCACCGACAACCAGAGGAAGTTGTTCTTCAGGAGACACTACGCTGTCAACACCGTCATCTTCTGCTCTCTGGACCCACAGGGCAGGAAATGGACAAGAGGCAGCGGTTCTACTGCAAAGATCTTTGGATTTGTCGCCAGGAAATCTCAGAGTGAGACTGAAAATATATGCCACCTGTTTGCTGAGCACGACCCTGAGCAGCCGGCGAGCGCCATCGTCAACTTCGTCTCAAAAGTTATGATTGGGTCACACAAGAAGTGAGGAGAAAGAGACTCGCTGCAGAGTGACCAGCCTGGACCGGGGATCCACTTCCAaacccctaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaca

Function

NR:

description
tensin-3-like

GO: NA

KEGG:

id description
K18080 TNS; tensin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811274.1 True 3990 mRNA 0.56 28 7007170 7067934

Neighbor

gene id symbol gene type direction distance location
si:ch211-191a24.4 LOC104966872 coding upstream 35870 6965547 ~ 6971300 (+)
ghrhrb LOC100710271,LOC101475240,LOC103357300 coding upstream 283893 6672071 ~ 6723277 (+)
cyldl NA coding upstream 366050 6627642 ~ 6641120 (+)
LOC120565762 LOC102311032 coding upstream 662089 6335751 ~ 6345081 (+)
tut4 zcchc11 coding upstream 717051 6262220 ~ 6290119 (+)
igfbp3 LOC103358919 coding downstream 40215 7108149 ~ 7127272 (+)
LOC120565613 NA coding downstream 195613 7263547 ~ 7285759 (+)
LOC120565797 slc22a23,LOC102794535 coding downstream 285914 7353848 ~ 7379344 (+)
LOC120566053 dusp22 coding downstream 330204 7398138 ~ 7413692 (+)
LOC120566212 irf4,LOC104941070 coding downstream 347507 7415441 ~ 7423820 (+)
G93834 NA non-coding upstream 14008 6992856 ~ 6993162 (+)
G93823 LOC104966896,LOC108248355 non-coding upstream 29624 6975644 ~ 6977546 (+)
G93820 NA non-coding upstream 31802 6974307 ~ 6975368 (+)
G93791 NA non-coding upstream 127089 6879803 ~ 6880081 (+)
G93790 NA non-coding upstream 130677 6876151 ~ 6876493 (+)
G93851 NA non-coding downstream 59380 7127314 ~ 7130751 (+)
G93888 LOC104954812,LOC103358918,LOC104927721,LOC102210208 non-coding downstream 63414 7131348 ~ 7134432 (+)
G93896 LOC102798054,LOC101466326,LOC100702846,LOC102303795,LOC102210503 non-coding downstream 88401 7156335 ~ 7156719 (+)
G93906 NA non-coding downstream 165212 7233146 ~ 7235719 (+)
G93912 NA non-coding downstream 204002 7271936 ~ 7287153 (+)
rhpn1 rhpn1 other upstream 625572 6354892 ~ 6381598 (+)
G93638 NA other upstream 793153 6202085 ~ 6214017 (+)
G93613 NA other upstream 955650 6035369 ~ 6051520 (+)
trmt1l trmt1l other upstream 2293937 4685224 ~ 4713233 (+)
LOC120565391 NA other upstream 2693655 4284755 ~ 4313515 (+)
G93938 NA other downstream 281876 7349810 ~ 7350587 (+)
LOC120565294 pycrl other downstream 810985 7878919 ~ 7890177 (+)
LOC120565614 NA other downstream 828211 7896145 ~ 7905247 (+)
G94073 rgs5,LOC107393027,LOC104951458,LOC100708109,LOC105932873 other downstream 1169436 8237370 ~ 8286436 (+)
G94199 LOC103367571,LOC102312400,LOC100710958,LOC101467655 other downstream 2079228 9147162 ~ 9168877 (+)

Expression


Co-expression Network