LOC120565861 (LOC103354068,LOC104966713)


Basic Information

Item Value
gene id LOC120565861
gene name LOC103354068,LOC104966713
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 34380747 ~ 34384027 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811929.1
CCgcagaggagcagagagagcaTTCCGCATCAGTCCTCTGACTCTCTCAccacctctctgtctctgactcgCAGGCAAAACTCGGACTTTTATACCGAGGCTAAATTTAGGGGGCTGTCCGGTACGCAGCGCCCCCATCCTGGACGCGCTTCCTTCCCCCAGCCTCGCATTGGTCTGATTTGTGCTGCAAACAACATTTATAAGAAAAGCTGCTCCTTccagacacacagctgcacaTGAGTGAAGAGCAGCAGCTCATCGGACCGCAGAAGAAGCAACGCGCTCTCTAGATTGTTTTCTGGAGACTCCGCGGACTCTGGTTATTTCcttgaaaacagaaaaagtgtatttaaggaagtttttttcaatttttttttttttttaaataacgcATGGAAATGGCCTTGAGTGGGACCATTTTACCATCAATCTCTACATTTGCCAACCAAAAGGAGAAATGTTGGGAAGATAGGTGGAAGGGCTATATGAGCGGCGTTGCGCTCAACATGGACAGCAGCTGCCTCGGCAGAAAAGACGAAGAGGACCTGGATAAGTTCTTGGATCTTGAGTTTATTCTCTCTAACACCAGCGTGTCCGACAGTGCGCCAGCCGCAGGGACCGGGGCAGAGTCCTACCGTCTCCAGGAGTCCGGGGTGTCCGTGtatcaccagcagcagcagcagcagcagcacaccgGGATGCCCCAGCAGCCGTCCAATTACACATCTGTCCCAGACATGAACAGCCCTCCGCCCGTCTACAACAGCCTGATGGCGGAGCTCCTTCGCTCCGACGTGGACACCAGCTTCCTCCCCGGGGAAAGCCCCAGCATCCAGGGGAGATTCCTCATCAGCTCCGCGCCTTTCCAGACCACTCAGGATTTATTCCCCGAGCATCCGAACATTAAAGTGGAGCCCGCCTCAATGGACACGTACGGACCTGTCGTGGGTCTGGTGCCTCAGAGCTGCACCAAAGTCAAGCACGAGGGGAGCGTTTCGTGCATGATGTCGTACGAGGAGCAGCCGCGGCTGGCCAACTCCCCGCAGGCAGCGGTGGGCAGTATGACGCCGCCTCTCAGCCCGGACGACCTGATGAGCTCCGAGTGCCACCAGACCCAGATGACATTCCCACAGAGCTTTCACCCCCACCACCGCTGCGCCTCCGCGGGATTCCCTCACCCGCACACGGGCATGCAGCTCCCGTTCCCCGTGGCGCACCATCACCACCAGTTCCCCGGGATGTTCGGCGAGGACGCAGCCATGGGCATGCAGCAGCCGGCGGCGGGACAGCGGGTCATGCTCACCCCGCCGTCCTCCCCGCTGGAAATGATGGACACCAAGCCGAAGAGGGGTCGCCGGTCCTGGCCGAGGAAACGGACTGCGACGCACACGTGCACTTTCGCCGGCTGTGGGAAGACCTACACCAAGAGCTCCCACCTGAAGGCGCATCTCAGGACGCACACAGGAGAGAAACCATACCACTGCAGCTGGGAGGGTTGCGGCTGGAAGTTCGCTCGTTCCGATGAGCTCACGCGTCACTTCCGGAAGCACACCGGTCACCGGCCGTTCCAGTGTCACCTGTGTGAACGGGCCTTCTCCCGGTCCGACCATCTCGCCCTGCACATGAAGAGGCACATGTGAGGAAaagaccaacaaaaaaaaaacatggcgcAGACAAGGACTTCTATGCACCGCATCAAGCCATAAAAAGAACTGTTATGATCAGACATAGAAGGATGCTGTGCAAATATATAGACGCAAAATCCTATAGGAGTAGCAACTATAGTGATGACATGACAGAATAAACTGCCATACAGTATGATGAGGCCACTATTGACTACACTGTAAGACCTATTATAGGAATATTATAGTGATTTTTCATCAGGGCAATAGGGGCATCACAATGACACGCCCTTGAGTTATATTTTGTGAaaagatttatttaaatgttatttttgagaCAAACAAAACCACAAGACTAACAGGAAATGCAGCCAGATAGACAGAAACAGATCATTCTGTTCGGACTAaaactttttttgttattttttttgttaactaTGTAGCTGGTACTACTTTTTGTATGGAATTCTGTTTATATAGACAACAAATTAAAGGAACATTCCACTCAACATGTCAGGCACATGCCACTGAAGCACTTGGAAGCGTGACAATCCTTTGAAGagcaaaactattttttttttgtatttcaccaTTAGTGCCTTTAATAACATGTTATTACACATCTTACGAGTGCCATATTCTCCACTGGCTAAAAGACAATCAAAGTTTTATTCTGCGTGTTATATTGTAAGTGTAAACAGCACGTGATATAAGCTTTGAGACAATGTTTTGTTCTAAAACTGCCATTTATTCTGTCCTCCCTGAAGGCTTGAATAGGATGTCATGTCTGTGAGTCTGTTGTCTAGCGTTTAAAGTCAGGTTCTTACAGTCGGAAGTCTCACAGAAGTCCACGCCATCTCAACACCACCTGATTGACAAAGGGCTACACAGTCTTTGGCAAAAAAGATTTGTTTGTATGCGTCTTGAAGGAATGTACTGCCTTGTAAattgaatcttttttttatatattgtaaatagtttattttaatgtacatATTAAACTAAATGAAGATGA

Function

NR:

description
PREDICTED: Krueppel-like factor 2

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K17846 KLF4; krueppel-like factor 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811929.1 True 2637 mRNA 0.49 3 34380747 34384027

Neighbor

gene id symbol gene type direction distance location
LOC120565538 cherp coding upstream 287172 34066115 ~ 34093575 (+)
si:ch211-247n2.1 LOC102307905,LOC103372256,LOC102782276,LOC101477182,LOC102211467 coding upstream 317172 34031890 ~ 34063575 (+)
si:ch211-51h4.2 LOC102206538,LOC102309665,LOC102076398 coding upstream 505651 33772446 ~ 33875096 (+)
ect2 ect2,LOC102798372 coding upstream 1969300 32221033 ~ 32411447 (+)
mcf2l2 NA coding upstream 2221302 31783226 ~ 32159445 (+)
LOC120565866 LOC105938272,LOC105937414,LOC105938273 coding downstream 70354 34454381 ~ 34456956 (+)
arhgap39 arhgap39 coding downstream 144541 34528568 ~ 34661669 (+)
hyi hyi coding downstream 1083984 35468011 ~ 35477553 (+)
ddx10 ddx10 coding downstream 1289333 35673360 ~ 35678429 (+)
LOC120566096 NA coding downstream 1315798 35699825 ~ 35737010 (+)
G100148 NA non-coding upstream 76401 34304090 ~ 34304346 (+)
LOC120565927 NA non-coding upstream 158616 34220623 ~ 34222131 (+)
G100043 NA non-coding upstream 1176001 33204180 ~ 33204746 (+)
G100028 NA non-coding upstream 1300906 33078937 ~ 33079841 (+)
G100013 NA non-coding upstream 1494598 32881680 ~ 32886149 (+)
G100161 NA non-coding downstream 66254 34450281 ~ 34450515 (+)
G100159 NA non-coding downstream 118537 34502564 ~ 34507602 (+)
G100199 lrrc41 non-coding downstream 282455 34666482 ~ 34677930 (+)
G100215 NA non-coding downstream 353480 34737507 ~ 34793890 (+)
G100257 NA non-coding downstream 465176 34849203 ~ 34849492 (+)
G100087 NA other upstream 502416 33875209 ~ 33878331 (+)
LOC120566032 naaladl2,LOC102797677,LOC101487368 other upstream 617828 33243213 ~ 33762919 (+)
nlgn1 nlgn1,LOC102797975 other upstream 1502114 32436847 ~ 32878633 (+)
LOC120565823 NA other upstream 2613208 31761992 ~ 31767539 (+)
G99803 NA other upstream 2749246 31629816 ~ 31631501 (+)
G100174 calr3 other downstream 120616 34504643 ~ 34507552 (+)
dsg2.1 NA other downstream 1831437 36215464 ~ 36234599 (+)
G100568 lmnb2 other downstream 2089511 36473538 ~ 36475195 (+)
smim24 NA other downstream 2111457 36495484 ~ 36534582 (+)
sass6 sass6,LOC102776185 other downstream 2212014 36596041 ~ 36611746 (+)

Expression


Co-expression Network