G106784


Basic Information

Item Value
gene id G106784
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 21252905 ~ 21256647 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU143417
cccctggtaaatattggagatgtatttgaaagatggagacagcttagatcccaaaaggacgcagagttggcttattttctcctgaacaggtaagcattagcttgaggctaatttatcacagctactaggggcatttttggtcatttcaacatttgtgtactcacattgaattatatagctagagtacccgagttggttactcgcaaaaacaattgagacacagccagtaaagtgatcccgactggtcctggctaacgccgccatgctaaccctgctacctgttaacgttaccggaggaccaggcatgcagcccatggctgtttacagcgtgtagcctcgtcagcggctggagccgacaacggtgagttattttaagccacgagaggggggctgtaaatcggaaagagaggactgtgagtgtgcagtgtgtttagcgattgttgccgtaattctaagccaatgaagtgtgttccgtcggcaaggtagtggtatatttagcgtttcgtattgttattattattctaagacgaggaagtgtgcctgactcgcgtgtggagaggacagtgaggttgttgtgtttttagcggttcatactgtaattttaagccgaaaaggtgtgtctgtcagttggttacagagctccgcgtgagcacgggcttttatgactgtcaatatagccagcatctaacgttagctactccgctgtgctgtggagtaatgtctggctatgtgagactagcatctaacgtacGCTGTGCTGAGTAATGTCTGGTATAATAGCATCactagctactccgctgtgctgtggagtaatgtctggctatgtgagactagcatctaacgttagctactccgctgtgctgtggagtaatgtctggctatgtgagacaagagtctagcaacattgttgtgaatgctgcggtctcagcctggcaacccccgtgaacttcgagtctgggcaggtgggggcgggggaaacgactctccagtattttgaattggtagtgcagtaactattttaaccgctagctgccagtattacacacaatattacatattgcacctttaaatactTTCTGATTGCTTAAAGGTAAAGGTTAACACTTAACTTTAACCCACCCTAAACACTATAACATAGGTtcataaaaatgtaacattataaTGTTGTTATGAGAAGATATAAGAATAAAattgtttgtgcatgtttgtatttgtgtgtgtgtttgatactCACGCCACACTGACGAAGGCTGCGTTGCCCCCGTAGAGGAAGGAGCGGTTGAGCACCTGCAGGATGAAGGTGAGGTACTGAAGCGGCAGGTACGGGGTGGAAGCAGAAACTGAGAACAGTAGACACTGCAACGCCGTCAGGAAGAGAGAAAGCCCCGAGGCCCGCAGGTCTGCTTCCTGTTCACTCTCtcctacaaaacacacacaaatgaaaacacacaccttatcctccaaagtgaaaaaaaataacgAAAATTACGATGAAAAAGCCAATCTTAGAAACAATCAAGTTTTTCTcttatgtaattttgttttgtatAATTGTTAAAAGGGAACATGAGGTTGGTGGTCATGGCAATTGGACTTCTCTTTATCCCTTACAGTAATGGGACTATTTTCAATTAATATTTATTGTCCCTTTAGAAATGCAAGAGCCCACTGACATGCTGGGCCCCTGAGAGCACACCCGGGACACACTGACAGTAGGTCTGCCATGGGTGTGGCCTGTTGGGTTCATTATTAGTCATTAGGAGCATTAGTATGTCACCTGCAGCCCGAGGTTTGCCCTTGTGTCTGTCCATGATGAGACCGTTCCAGGGAGCACACAGCACGCCACACAACTGCGTTATAGCAAAGGCATTGGTGTACTGGCTCACTGCAGGGACACACAGGCAAGGACAAGATGGTTACAGACATGAGACTCCAACAAAGAGTTCAACAAGTCTACCAGAATAAAAGATAACAGTACTTTCTATCTGAGCAGCTTCTTGCTCATATTATATTACTTTAGTCACAACCTCTTAGTTAAAGCACAGGCTAACCGGTTAGTATGCAGGTAACTTCATGGACCTAATGAGGAAGGTTTGCACAAACGTCCATCTTTGCTAAGACATGatgtagtgtttgtgtgtgtttacccaGTGAAGGCTCTCCCGCCGTCAGCCGCTGCAGCATGGGGTTGAGGGTGCCGATAAAGAGGTAATGTCTGAGCTGCATGACCGACAACCAAACCACGTGCCACACAAAGAACCTGGACATCACACACTCACGGAAACTCTTCTCtgagagagatgaggagaggCCACAGAGATAGATGAAGACGAGGAAGAAACAAAGATGAAGAGAAATAGTATGTATGATTACTTTCTTCTGTTATATCTTATTATGTCATTATCTGTGCCACTGTAGAGTCAACAAACCTTGTTTCACAGGTTCCTTGTTGAATGGCGTTTCCTCTGTCGTCATCTGTGTGTTAGCATTGGCTGCTGTCTGCTCTAAGCTCAGACTATTTGATTTACCACAGGTTACCCTgacaaaggtcaaaggtcacagtGGGTCAGACACTTTTTCAAATGAGGTTTTCAAGTCATAACCAGCTATAATCGCATAACAGGATATGAAGGATTTTTTCCAAGGAATGTGGCACAATGAtatgaaaataattataaaaataataataatttgtggtTTTGCAAGACACTTTAATCcattaattgtttgtttgcCTTTCAACATTTGCAACTGAATGTATTGATCATGAACCAGTTTTGTTGGATGAGGATAAGCTACGTGTTTATGCTCTCTCACACTGCTGTAAGAGCACACTGATTTGTGCTGTGAACTGTAGAGTAGACTTCAAGCTTCAGCTCAAGTAAGCCAAGTCTGTAGcatttttaaaaccaaattATAACTTgtgtctttgttgtttatttataatttttctaATATTTGCAACAAACTAAATTCAGAAAATCAGGAAATAATGAGCCCTTTTTCTCTTGATGTATCCCTGAAGCATATGCGAGGtgttgatgtatgtgtgtggtttctTGGGGATTTGTACCCGTATGTGTAGTGGTCAGGCACGGTGTAGGGTATGTGGCCTCTGGGCAGCAAGAAGAAAGTCCTGAGCAGGTGAATGAAGCTGCAGGCagacaggaagaggaaggaggagcgGAGAGAGATGCCAGCCTCGTGTAACAGCTGCAGGAGAAGATAAGACAGGGTGGAGCTCACCGTTACAACATGAGATGGAATAAATATGTTTCACACATGAGAGCAgtttgtgaatgtttttttcaccTTGATGACAAGGAAGAGTGCTGAGGAAGAATCGAAGGCCCCGTTATAGAGAGTGATGATGGTGGAGCGATGTGAGCCAAAAAGGTTTCCTACCTTTAGGAGAGAAATTTAAATTGATTAAGAATTATACAGATGCTGTTTCATTCCACACTTTTCATAAACAGTACTCCCTACCTCCTGGTCTGTTGTTAGTTCCTTTTGAACTGAGCATTTTTGCTACCAACGGTTTGGACTCTTACTCAACATGGCTGAATATTGTGCAGTCTACTTTGCAGGAAACTATACTTGGCAATCGGAACACACCCTGAGACTTTCTCTGAAAGTCCTTTACTAACGAGCGCATTGACTGTAACACTCACAGGTCAACGTGACTTCTTACCTTCCTTTGTTACCTAACTTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU143417 True 3714 lncRNA 0.43 2 21252905 21256647

Neighbor

gene id symbol gene type direction distance location
smtnl1 smtnl1,LOC106942261 coding downstream 14382 21233306 ~ 21238523 (-)
LOC120567254 NA coding downstream 22530 21220217 ~ 21230375 (-)
LOC120566637 ctnnd1 coding downstream 33474 21196765 ~ 21219431 (-)
LOC120566536 NA coding downstream 56241 21187612 ~ 21196664 (-)
crybb1l1 LOC103354769,LOC101482390,LOC100705848,LOC102798478 coding downstream 74133 21176882 ~ 21178772 (-)
tmx2a tmx2 coding upstream 45423 21302070 ~ 21308135 (-)
slc43a1a slc43a1 coding upstream 57647 21314294 ~ 21348934 (-)
clcf1 clcf1 coding upstream 110441 21367088 ~ 21381178 (-)
zgc:113229 NA coding upstream 160047 21416694 ~ 21423613 (-)
tbc1d10c tbc1d10c,LOC106938142 coding upstream 172847 21429494 ~ 21438163 (-)
LOC120566633 NA non-coding downstream 88842 21149902 ~ 21164063 (-)
LOC120566356 NA non-coding downstream 178992 21070141 ~ 21073913 (-)
G106645 NA non-coding downstream 252694 20999959 ~ 21000211 (-)
LOC120567470 NA non-coding downstream 292013 20955337 ~ 20960892 (-)
G106632 NA non-coding downstream 305332 20946038 ~ 20947573 (-)
G106793 clp1,LOC102795812 non-coding upstream 29667 21286314 ~ 21287781 (-)
G106802 med19 non-coding upstream 55716 21312363 ~ 21314127 (-)
G106813 NA non-coding upstream 103669 21360316 ~ 21408289 (-)
G106825 ssrp1 non-coding upstream 132965 21389612 ~ 21401183 (-)
G106848 NA non-coding upstream 184177 21440824 ~ 21443089 (-)
LOC120566634 LOC104961169,LOC103354768,LOC101069382 other downstream 65252 21178852 ~ 21187653 (-)
G106728 mif other downstream 121935 21127838 ~ 21130970 (-)
LOC120566885 ppp2r2c other downstream 142838 21075757 ~ 21110067 (-)
G106443 LOC103366336,LOC104937910,LOC104959671 other downstream 1018981 20230908 ~ 20233924 (-)
fgf18a fgf18,LOC103359300,LOC103390897,LOC106511287,LOC105939829,LOC104951878 other downstream 1271272 19971833 ~ 19981633 (-)
G106988 NA other upstream 533606 21790253 ~ 21790725 (-)
G107015 NA other upstream 863038 22119685 ~ 22120067 (-)
G107117 NA other upstream 1434513 22691160 ~ 22692831 (-)
G107235 rom1,LOC103366586,LOC102779683 other upstream 1734340 22990987 ~ 22993229 (-)
trpt1 trpt1,LOC102777684 other upstream 1835918 23092565 ~ 23177026 (-)

Expression


Co-expression Network