G106872


Basic Information

Item Value
gene id G106872
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 21490056 ~ 21490821 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU143545
TAGAGAATCAACGTGTTGGCTTGTACCCAGGTTTAATAAACTCAAGACATCCATCTAGCTACAAACAGGAAATGACCCACACTGTGGGACCTCTCATACCTATCTTGACAGGGAAGCCTGGTGGCAGGCGCAGGGTGATGAAGTCACGTAGCTTGGCAAAGTGGGCGTTGGAGATGGCCATGAGGTCGATGATGGGTGTCACCTGCTCAGCCAGAGACAGAGGGTGACTCTCACTCAACCACAGTGTCGCTTTAAAACTTCTGGACTTTGCTGGTAAGCTCGACGGGACGTCCGATGTCCCGGCTGTTCAGGTTGAACTCCGGGTTGAAGTATTCCTCAGCTGTGATGGCTGTAGGGTTGTGAGGACTGGCACACTGGGACACGTTACtctgacagaaacacagagagagagttataAGTGTTCATCAAAGAAAGCTGCAGGTGGTGTGGGTGGTGTGCGTGTGGATGTGATGCACAGGTACTGTGGAGACTCTTACCCCATTGTGAGCTGTATGTTGTTCAGCAATCCCCAGGAAGGACTGCAGAGGAGTCTTTGAGCCTGTGTGGGAATAATGTAGGGAGATCATCATCAATCTGCTCGGCATATTCACTTTATTTTGTGCTCCATGAGGAAGACAAGGGATACATCTGGA

Function

NR:

description
PREDICTED: sterile alpha and TIR motif-containing protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU143545 True 653 lncRNA 0.50 2 21490056 21490821

Neighbor

gene id symbol gene type direction distance location
tbc1d10c tbc1d10c,LOC106938142 coding downstream 51893 21429494 ~ 21438163 (-)
zgc:113229 NA coding downstream 66443 21416694 ~ 21423613 (-)
clcf1 clcf1 coding downstream 108878 21367088 ~ 21381178 (-)
slc43a1a slc43a1 coding downstream 141122 21314294 ~ 21348934 (-)
tmx2a tmx2 coding downstream 181921 21302070 ~ 21308135 (-)
LOC120566376 NA coding upstream 4073 21494894 ~ 21500640 (-)
LOC120566537 LOC104958700,LOC103358614 coding upstream 16248 21507069 ~ 21510003 (-)
LOC120566697 NA coding upstream 129042 21619863 ~ 21621608 (-)
si:ch211-175m2.5 LOC104942593,LOC103358585,LOC101471829 coding upstream 201866 21692687 ~ 21697083 (-)
pcdh11 LOC104946172,LOC103356418,LOC101473199 coding upstream 393951 21884772 ~ 22015753 (-)
G106852 ran,LOC105022884 non-coding downstream 43330 21443397 ~ 21446726 (-)
G106848 NA non-coding downstream 46967 21440824 ~ 21443089 (-)
G106813 NA non-coding downstream 81767 21360316 ~ 21408289 (-)
G106825 ssrp1 non-coding downstream 88873 21389612 ~ 21401183 (-)
G106802 med19 non-coding downstream 175929 21312363 ~ 21314127 (-)
G106959 eef1g non-coding upstream 210128 21700949 ~ 21725692 (-)
G106989 klhl4,LOC104919997 non-coding upstream 300984 21791805 ~ 21792629 (-)
G106990 NA non-coding upstream 304990 21795811 ~ 21796361 (-)
G106991 NA non-coding upstream 307402 21798223 ~ 21800003 (-)
LOC120567355 NA non-coding upstream 363587 21854408 ~ 21857861 (-)
LOC120566634 LOC104961169,LOC103354768,LOC101069382 other downstream 302403 21178852 ~ 21187653 (-)
G106728 mif other downstream 359086 21127838 ~ 21130970 (-)
LOC120566885 ppp2r2c other downstream 379989 21075757 ~ 21110067 (-)
G106443 LOC103366336,LOC104937910,LOC104959671 other downstream 1256132 20230908 ~ 20233924 (-)
fgf18a fgf18,LOC103359300,LOC103390897,LOC106511287,LOC105939829,LOC104951878 other downstream 1508423 19971833 ~ 19981633 (-)
G106988 NA other upstream 299432 21790253 ~ 21790725 (-)
G107015 NA other upstream 628864 22119685 ~ 22120067 (-)
G107117 NA other upstream 1200339 22691160 ~ 22692831 (-)
G107235 rom1,LOC103366586,LOC102779683 other upstream 1500166 22990987 ~ 22993229 (-)
trpt1 trpt1,LOC102777684 other upstream 1601744 23092565 ~ 23177026 (-)

Expression


Co-expression Network