G107117


Basic Information

Item Value
gene id G107117
gene name NA
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 22691160 ~ 22692831 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU143931
ACCTCTTGGCTGTAGTCATCATACTCAAGGGACAGATCAATCGCTGGTGTGTTGTTGTGATCAGCAGTGTAGATGTATTTCAGCCGCTCAGGTTTAGACTGAATGTGGTTTTGTTTTACTAAGTTTTGATCCATGTTTTCTGAAATGCTTAGGGCAACAGTTGAGACCTTCTCATTCATCTGTGGATTGCTGTTCAGTAAGATCTCGTTGCTCTTTTCAAGCTCTCCCTTCGTCCCATTATTCGCACTTGACATTTTACTCCTCTCCTCAGCTTTTTCTTCGGCACCAGTGTCAGTTCTATTTTCCATAGCCTCTTTTGTGACCTCTATCCCAGTTCCTCCATCTTCTGAGGCTCCAGAACTGATATCTACATCTGTCCAGTTGCCCTCTGCCTGTCTTCTCTGCCTGCCACCCCCCTCTCCTCCAGACTCAGTCCCATTTTGAGAAACGGTTgactccccatctctctctatATCCTCCAAGATATCCTGTGGGATTCCTTCCTCTGCTTCCAGCTGACATCCTGACTGTTCTGCCGCCCCAGTCTCCCCATCAGTGACATTTTGACTGGAAGTGTTTACTGATTGAGTGTTGTTATTAGCAAAATTTTTCTTACACACTTGAACCAACTGTGTGCGATTTTCAGGTCTTCTGCCCCTCGGCTGTAGATCTAGCTGATCCATATAATCAGAAATATCGTATTCCACCCCATCATGATCGACTCGGTTTCCATCGTCGCTTTGACGAACGGTGTAACGGATGCTCATCCCCCGACTCTTGAGGCTGCCATGGGGAAGAGGGTGAGGACGGACTGGTAAAGGCCTTGGTACTGAAATAGGTTTCCAGTGAAGTAAACAGAGAGGAAGTTACTCTGGGTGCCCACATTGGCCACATGCCAGAAGGTGACGTCAGTTTCAGACACCACAAACTGACGGCCGCCGAACATGGCGCCGTTTATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU143931 True 960 TUCP 0.48 2 22691160 22692831

Neighbor

gene id symbol gene type direction distance location
tsc22d3 LOC103390732,LOC104954424,LOC101161414,LOC103356417,LOC102306956,LOC102786303 coding downstream 282949 22375266 ~ 22408211 (-)
pcdh11 LOC104946172,LOC103356418,LOC101473199 coding downstream 675407 21884772 ~ 22015753 (-)
si:ch211-175m2.5 LOC104942593,LOC103358585,LOC101471829 coding downstream 994077 21692687 ~ 21697083 (-)
LOC120566697 NA coding downstream 1069552 21619863 ~ 21621608 (-)
LOC120566537 LOC104958700,LOC103358614 coding downstream 1181157 21507069 ~ 21510003 (-)
slc16a2 slc16a2 coding upstream 26063 22718894 ~ 22743071 (-)
LOC120567161 NA coding upstream 85574 22778405 ~ 22783217 (-)
dpf2l dpf2 coding upstream 137579 22830410 ~ 22840569 (-)
si:ch211-168f7.5 LOC103356264,LOC104942684 coding upstream 169317 22862148 ~ 22874782 (-)
ehd1a LOC104934092,LOC103356238,LOC105928696,LOC102204816,LOC101482200,LOC100701452,LOC104942686 coding upstream 191254 22884085 ~ 22899160 (-)
G107097 NA non-coding downstream 5702 22683733 ~ 22685458 (-)
G107072 mid2 non-coding downstream 85492 22601140 ~ 22605668 (-)
G107070 NA non-coding downstream 96279 22592660 ~ 22594881 (-)
LOC120566739 NA non-coding downstream 98914 22590860 ~ 22592246 (-)
LOC120566740 NA non-coding downstream 212702 22453589 ~ 22478458 (-)
G107102 NA non-coding upstream 20206 22713037 ~ 22718770 (-)
G107160 NA non-coding upstream 163294 22856125 ~ 22856346 (-)
G107215 NA non-coding upstream 182665 22875496 ~ 22876459 (-)
G107220 NA non-coding upstream 236023 22928854 ~ 22973760 (-)
G107282 NA non-coding upstream 477317 23170148 ~ 23224456 (-)
G107015 NA other downstream 571093 22119685 ~ 22120067 (-)
G106988 NA other downstream 900435 21790253 ~ 21790725 (-)
LOC120566634 LOC104961169,LOC103354768,LOC101069382 other downstream 1503507 21178852 ~ 21187653 (-)
G106728 mif other downstream 1560190 21127838 ~ 21130970 (-)
LOC120566885 ppp2r2c other downstream 1581093 21075757 ~ 21110067 (-)
G107235 rom1,LOC103366586,LOC102779683 other upstream 298156 22990987 ~ 22993229 (-)
trpt1 trpt1,LOC102777684 other upstream 399734 23092565 ~ 23177026 (-)
G107284 LOC103374305,LOC102779018 other upstream 436878 23129709 ~ 23134785 (-)
rnaseh2c rnaseh2c other upstream 491361 23184192 ~ 23187058 (-)
rab41 rab41,rab6ba,LOC106515338,LOC106604734,LOC107696768 other upstream 1191757 23884588 ~ 23988901 (-)

Expression


Co-expression Network