G107487 (mrpl11,LOC102790704)


Basic Information

Item Value
gene id G107487
gene name mrpl11,LOC102790704
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 23590328 ~ 23626289 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU144403
CACACAGGTCGGGTTCATGGCACCTCAGGTCAATACAATAATAGTATAGAAAGCGCACCGAGCACAGAATCGAGACTTACTCGCTGACAATCTTGATGCCGAGTGAACGAGCTGAGCCGATGATGCTTTTGACGACGGTCTCAAGGGAGGAGTTCCTCATTTTGAAGCACTCGTCCTCGGCTTTCACCTGGGCAATCTCATACACCGCCCTCACCGACACCATCCCCGCTGTCTCgtggcCTGTCTTGCCGGCCCCTTTCGCAATGCCGGCTGCTTGCTTGAGAAAGTAAGACACTGTGGGCTGGCCAATCTTCAGGTCATAGGTTCTGTCGGGCTTTACATGGATCTTGATTGGGAGAGGGATGCCCTCCTTCAGCTCCTTGGTTTTCTCATTGAAGTCCTTGCAGAACTGCCCAATGGGGATTCCTctctgtCCAGGATGGGGCCTAGTGGAGGTCCAGGGGCCGCTTGTCCTGACCTCACTATAGCCCGGATTACATTGCTGGCATCCAATTTCTTCACAGCCTTGGCTGCCTTAGAGATCTTTGACATCCTGTTCTGTCTCGAAAGCCTTAAATCTGCCTCCAAGTCAACTGAGAATCCATCCACTGATTTGTCCTGTACCTTCACGCCGTTAGCAGCATCCTTCAGGGCGCA

Function

symbol description
mrpl11 Predicted to enable large ribosomal subunit rRNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in ribosome. Predicted to be part of mitochondrial large ribosomal subunit. Orthologous to human MRPL11 (mitochondrial ribosomal protein L11).

NR:

description
PREDICTED: 39S ribosomal protein L11, mitochondrial-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU144403 True 657 TUCP 0.53 5 23590328 23626289

Neighbor

gene id symbol gene type direction distance location
npas4a npas4,LOC102790988 coding upstream 4756 23579577 ~ 23585572 (+)
efemp2a efemp2 coding upstream 30485 23549121 ~ 23559843 (+)
fibpa fibp coding upstream 42595 23541976 ~ 23547733 (+)
fosl1a fosl1 coding upstream 54630 23532103 ~ 23535698 (+)
si:zfos-80g12.1 LOC103374023,LOC107378313,LOC106515654,LOC103390849 coding upstream 147050 23430886 ~ 23443278 (+)
lnx2b LOC103373828,LOC101477438,LOC102298784 coding downstream 36368 23662657 ~ 23684696 (+)
tex11 NA coding downstream 133788 23760077 ~ 23770188 (+)
pdzd11 pdzd11,LOC106604732 coding downstream 242853 23869142 ~ 23878676 (+)
inppl1b LOC104923483,LOC103373706 coding downstream 265127 23891416 ~ 23926666 (+)
p2ry4 p2ry4,LOC104957995,LOC106515297 coding downstream 305357 23931646 ~ 23938563 (+)
G107410 ccdc85b,LOC102791751 non-coding upstream 50946 23535861 ~ 23539382 (+)
G107377 NA non-coding upstream 172785 23417224 ~ 23417543 (+)
G107353 stx5 non-coding upstream 269679 23319392 ~ 23320649 (+)
G107340 NA non-coding upstream 302650 23285363 ~ 23287678 (+)
G107341 NA non-coding upstream 305114 23282979 ~ 23285214 (+)
G107507 slc25a5,LOC106926499,LOC103140121,LOC101464643,LOC102200398,LOC104931197 non-coding downstream 17003 23643292 ~ 23644515 (+)
G107531 NA non-coding downstream 60305 23686594 ~ 23688072 (+)
G107565 dlg3,LOC102786504 non-coding downstream 172368 23798657 ~ 23800227 (+)
G107570 NA non-coding downstream 258304 23884593 ~ 23985057 (+)
LOC120567136 NA non-coding downstream 320302 23946591 ~ 23976908 (+)
G107386 cfl1 other upstream 95339 23492844 ~ 23494989 (+)
LOC120566905 LOC104953971 other upstream 97790 23488285 ~ 23492538 (+)
ubl3b ubl3,LOC100692344,LOC101472018,LOC104925552,LOC103390851,LOC104960676 other upstream 124123 23454540 ~ 23466205 (+)
G107333 NA other upstream 320112 23268791 ~ 23270216 (+)
tgfb5 LOC104925539,LOC103374198,LOC102800105,LOC105920438,LOC102314494,LOC101466107,LOC100690458 other upstream 328067 23252755 ~ 23262261 (+)
LOC120566416 NA other downstream 229236 23855525 ~ 23865274 (+)
arhgef6 NA other downstream 761195 24387484 ~ 24453913 (+)
G107789 tmem35a other downstream 1178911 24805200 ~ 24808701 (+)
nox1 nox1 other downstream 1213897 24840186 ~ 24846893 (+)
apln NA other downstream 1446924 25073213 ~ 25097023 (+)

Expression


Co-expression Network