G107704



Basic Information


Item Value
gene id G107704
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 24412910 ~ 24413556 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU144705
TACCAAATGCTATTGAGAATGAAGAAAAGTTGGATGAAGATGCAGCCGAAGGGCAGGATACCACCCATCACTATACCAGGAATAGGCTTTGTAAAGAAGGACTGCTCAGGAATCTGACGGGGGATTTGGTTTGTTCGCACTGGTTGCTCAATTGCGGTTTCTTGAATCCAAAGTAGGCACCAACAAAGGTGAGGGGCACAGAGATTCCAAACCACAGAGCCAAAATGGCCACCAGAGTGCCAAAGGGGATTGCTGCTGAGGAACCTTCCACCCAAAGGATCAGGTTCATCAGGAAGAAGTCTGCAAACACAATACTAGGGGAAGAAAGGTGGATGACAGACAATGAAAGACAATATTTGTGAGAGTGGGCAAGATAACATAGGAGCATATACAGCGTAACATCTTGCTCTAGCACTCCAGGGCAGAAATGGAGTACAAAAATTAGACAAATGAACAAAAATCTGCTTAGCAATTGAACTTACCCTGGGCACAAGAGTGCTGTCAGCAAGACATTTGTCTTCCACTTTTCACCTCC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU144705 True 535 lncRNA 0.45 2 24412910 24413556

Neighbor


gene id symbol gene type direction distance location
gpr101 gpr101 coding upstream 4884 24404188 ~ 24408026 (+)
zic3 zic3 coding upstream 73978 24333709 ~ 24338932 (+)
fgf13a fgf13,fgf13a coding upstream 211417 24102189 ~ 24201493 (+)
mcf2a mcf2,LOC106941039 coding upstream 329216 24060121 ~ 24083694 (+)
atp11c atp11c coding upstream 356634 24006407 ~ 24056276 (+)
rbmx rbmx,LOC102781209 coding downstream 7305 24420861 ~ 24426199 (+)
map7d3 map7d3 coding downstream 82113 24495669 ~ 24527611 (+)
taf7 taf7l,taf7 coding downstream 145700 24559256 ~ 24568647 (+)
LOC120566612 LOC100702800,LOC102305317,LOC101472616,LOC103353306,LOC105925836,LOC107089258 coding downstream 155492 24569048 ~ 24583867 (+)
xkrx xkrx coding downstream 410499 24824055 ~ 24840061 (+)
G107596 NA non-coding upstream 353661 24056541 ~ 24059249 (+)
G107570 NA non-coding upstream 427853 23884593 ~ 23985057 (+)
LOC120567136 NA non-coding upstream 436002 23946591 ~ 23976908 (+)
G107565 dlg3,LOC102786504 non-coding upstream 612683 23798657 ~ 23800227 (+)
G107531 NA non-coding upstream 724838 23686594 ~ 23688072 (+)
G107708 NA non-coding downstream 4035 24417591 ~ 24418293 (+)
G107709 NA non-coding downstream 13718 24427274 ~ 24427808 (+)
G107770 slc9a6 non-coding downstream 143065 24556621 ~ 24558239 (+)
G107790 arl13a,LOC105925700,LOC102776915 non-coding downstream 400092 24813648 ~ 24818151 (+)
G107801 cstf2 non-coding downstream 444292 24857848 ~ 24859722 (+)
LOC120566416 NA other upstream 547636 23855525 ~ 23865274 (+)
G107487 mrpl11,LOC102790704 other upstream 786621 23590328 ~ 23626289 (+)
G107386 cfl1 other upstream 917921 23492844 ~ 23494989 (+)
LOC120566905 LOC104953971 other upstream 920372 23488285 ~ 23492538 (+)
ubl3b ubl3,LOC100692344,LOC101472018,LOC104925552,LOC103390851,LOC104960676 other upstream 946705 23454540 ~ 23466205 (+)
G107789 tmem35a other downstream 391644 24805200 ~ 24808701 (+)
nox1 nox1 other downstream 426630 24840186 ~ 24846893 (+)
apln NA other downstream 659657 25073213 ~ 25097023 (+)
rpl39 NA other downstream 866012 25279568 ~ 25282207 (+)
LOC120567498 NA other downstream 867392 25280948 ~ 25281080 (+)

Expression



Co-expression Network