Gene
RNA
| Item | Value |
|---|---|
| gene id | G107801 |
| gene name | cstf2 |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053121.1 |
| NCBI id | CM020918.1 |
| chromosome length | 40300294 |
| location | 24857848 ~ 24859722 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| cstf2 | Predicted to enable mRNA binding activity. Predicted to be involved in pre-mRNA cleavage required for polyadenylation. Predicted to act upstream of or within mRNA polyadenylation. Predicted to be located in nucleus. Predicted to be part of mRNA cleavage and polyadenylation specificity factor complex. Orthologous to several human genes including CSTF2 (cleavage stimulation factor subunit 2). |
| description |
|---|
| PREDICTED: cleavage stimulation factor subunit 2 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU144841 | True | 1304 | lncRNA | 0.45 | 4 | 24857848 | 24859722 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| xkrx | xkrx | coding | upstream | 17787 | 24824055 ~ 24840061 (+) |
| LOC120566612 | LOC100702800,LOC102305317,LOC101472616,LOC103353306,LOC105925836,LOC107089258 | coding | upstream | 273981 | 24569048 ~ 24583867 (+) |
| taf7 | taf7l,taf7 | coding | upstream | 289201 | 24559256 ~ 24568647 (+) |
| map7d3 | map7d3 | coding | upstream | 330237 | 24495669 ~ 24527611 (+) |
| rbmx | rbmx,LOC102781209 | coding | upstream | 431649 | 24420861 ~ 24426199 (+) |
| bcorl1 | LOC103352940 | coding | downstream | 7647 | 24867369 ~ 24893243 (+) |
| srpx2 | srpx2 | coding | downstream | 60585 | 24920307 ~ 24927968 (+) |
| zdhhc9 | zdhhc9 | coding | downstream | 88286 | 24948008 ~ 24980800 (+) |
| clic2 | clic2 | coding | downstream | 321266 | 25180988 ~ 25186479 (+) |
| c1galt1c1 | c1galt1c1 | coding | downstream | 335021 | 25194743 ~ 25197196 (+) |
| G107790 | arl13a,LOC105925700,LOC102776915 | non-coding | upstream | 39697 | 24813648 ~ 24818151 (+) |
| G107770 | slc9a6 | non-coding | upstream | 299609 | 24556621 ~ 24558239 (+) |
| G107709 | NA | non-coding | upstream | 430040 | 24427274 ~ 24427808 (+) |
| G107708 | NA | non-coding | upstream | 439555 | 24417591 ~ 24418293 (+) |
| G107704 | NA | non-coding | upstream | 444292 | 24412910 ~ 24413556 (+) |
| G107803 | mid1ip1,LOC104928730,LOC103352948 | non-coding | downstream | 47630 | 24907352 ~ 24937765 (+) |
| G107814 | NA | non-coding | downstream | 70017 | 24929739 ~ 24933695 (+) |
| G107818 | trmt12 | non-coding | downstream | 83828 | 24943550 ~ 24944540 (+) |
| G107819 | NA | non-coding | downstream | 85605 | 24945327 ~ 24945704 (+) |
| G107820 | NA | non-coding | downstream | 87016 | 24946738 ~ 24946942 (+) |
| nox1 | nox1 | other | upstream | 10955 | 24840186 ~ 24846893 (+) |
| G107789 | tmem35a | other | upstream | 49147 | 24805200 ~ 24808701 (+) |
| arhgef6 | NA | other | upstream | 403935 | 24387484 ~ 24453913 (+) |
| LOC120566416 | NA | other | upstream | 992574 | 23855525 ~ 23865274 (+) |
| G107487 | mrpl11,LOC102790704 | other | upstream | 1231559 | 23590328 ~ 23626289 (+) |
| apln | NA | other | downstream | 213491 | 25073213 ~ 25097023 (+) |
| rpl39 | NA | other | downstream | 419846 | 25279568 ~ 25282207 (+) |
| LOC120567498 | NA | other | downstream | 421226 | 25280948 ~ 25281080 (+) |
| sept6 | sept6,LOC106945475 | other | downstream | 431885 | 25291607 ~ 25310218 (+) |
| btk | btk | other | downstream | 1601566 | 26461288 ~ 26476570 (+) |
