G107814


Basic Information

Item Value
gene id G107814
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 24929739 ~ 24933695 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU144860
GGAGTGCaacatgaaaaataataattaaaaaaaaagtacccaAACCAATTCAGGGTGAAGGCCAAAACAACCAACAAAAGAATCTACTGCCTCAAAAACCTAAACCATCAGCTTTAGTCCCATTTACAAAAGGTGGATTATTCTATTTACGATACTCACAATTAACCAACTGAGGAAATAGGCCTAACAAGATCTCACAGAAGAGCAATTGTGTAAGTAACCCACAAAGGAGAAAGATCTgataaattcacttctgactgCCTTAAAAGCCAGGTGAAAAGAAACGTCATGCATTGAATTCTATCTTTTACCTTCTCCGGAGCTGAGACGGACTCCTCCCAGGAACTCGTTGCTCAGCATGGCTTCTCTGTCCCAAACGGTCAGCTCCAGACACATCTCCTCCAGCTGCTCCAAAGCCAGCTCCTTGTACACAAATGTGTGGTCGTAGTGGGGGTTCAGGTTCTTCTTCACAACTGGAGTCTTCCTCTTTGTGGTCTTGGTCTTAGTCGGGAACAAGTACCTGCAGAATCATAAATAGAGGGAAGTCTTGAAAGAGAAATGCTTGTTTGGGGATGCAATGTGTCATTTTAAGACTGGAGACTTTATCGCTAACCCTTTAACGAAGCTATCTGAGGTGTCTCCTGGTTTCATTGCCATCAAATTCTTTGCCTCTTTAATTAGGACCTGCAGTTCTCCTCTCTCAATCACCGACTTTTTGCCTGAGGAGAAGACCGACACTCTTAGAAAATCAAGACAAAGTGCATCAAACACAGTCAGAGCTTCTTATCATAGTCTTACCTTTGGTTTTCTCAGATGTTGGCTTTTTAGGGGAGACATACTTCAAGGAGATCACCAACTCTCCTTTGTACTGAGCAAAAGCTGTAGATGACACAGCAGGTGCTGACTGTAAGAAAATACATTATAGTATTATATTTAAGACACAAGAAACCCACAAGAAAATACAGGAAGAAAAATCTAATTAACACTAATAactacaataataacaataactacTAATAAACACTTAATGTAgacaaaaatatttacaaaaaggttCCTTTAATTTGGTTattagtcataaaaaaaaagaagtgtgcAATTAAAAATTGAGTTTTTAACTTGACCAAATATGTAATGGATTCTCACTTTCTAAATGACCTCAAACACAATCTTAGTGTTTACACATCAGCCAACATATTGAtaaagatatatatcgGTGAGAGCCAAGATCTATACAGGTCAGGCTCTACTCCTCACAGCCAATCAATAGCTTCACCTTGTTTTGATTTGCTTAGACTTTTGGGCCACTCATTTTGGGCCACTGATTTTAAACATGCTGAAGTGCACTGGTGATCGTGATCTGATCAGCACTGATTAGTTCTGTCAAATATGGCAGTCAAAAACACTTTGTTAGCTTGTCAATCAACTGTGTCCTTTATGTCCGTAATACCTCGGTTAGTTTCAGCTAATGACCGCTGTTCCTCCTTGTTTTTATACCCATGCTATGTGCAATTTTAGCACACACGATTTTGCTCTCTTTTGTTCGTTTGACAACTCACTTGATTGCCAGACTTCTGTTTTCTCTGACAAACGTTATTCAACATAGCATTAAACATATTCGTAGCAAAAGTGTTTATAATTGATACAAAAGAGGTACCCGGTGCTTTTTTTGACCTCTAGTAGCGCTATGCAGCAATATTTTACTTCTGGGTCCCCTTTTTGTTTAATCGCATGTGCATGCGGGTGACGAGGTTCACATTCCTGCCAATGGTTTCACACTCTTCCACAGATCTGCATATGACGGTAATCAAACACCAGCAAAGAcagggaagaagaagactgctagCAAGTAAACATGTATGCAAACAACGCAGGTTTCAAACTTTTAAGAAAAATTGGTtatgttttatgaggaaggaaatgcatttAACACGTTTGTTAGATCTCATGagaaacactgaatgtaaacagaAACTTTGATTACAAGAAAACGGACAAATGACACCTTTCAGTCCCATTTCCTTGAGGGGGTTTACATTATTTTGTCTAGACTACACAATATGGATCAAGAGGTATTCTGTGGAGTTTTTAACCAAGTACAAGAAAAGTCCACAGGGTACTCATGGTACGCAAAAGAAAACCACATCCAGTTTCCCTGATCTACCTTCGCCATGAGAGCCACGCGGTCCTCGTACGGGGAGTCGAGGTCTCGGGTGTCCAGAGGGATCTCCACCTCTCCAAGGAAAGCGTTGCGGCTGAAGCGACCATGATGCCAGACTGATATCAACATGGAGCGGGTGAACAGCTGAGAGCGGCTGATAGAGTACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU144860 True 2328 lncRNA 0.40 2 24929739 24933695

Neighbor

gene id symbol gene type direction distance location
srpx2 srpx2 coding upstream 1771 24920307 ~ 24927968 (+)
bcorl1 LOC103352940 coding upstream 36496 24867369 ~ 24893243 (+)
xkrx xkrx coding upstream 89678 24824055 ~ 24840061 (+)
LOC120566612 LOC100702800,LOC102305317,LOC101472616,LOC103353306,LOC105925836,LOC107089258 coding upstream 345872 24569048 ~ 24583867 (+)
taf7 taf7l,taf7 coding upstream 361092 24559256 ~ 24568647 (+)
zdhhc9 zdhhc9 coding downstream 14313 24948008 ~ 24980800 (+)
clic2 clic2 coding downstream 247293 25180988 ~ 25186479 (+)
c1galt1c1 c1galt1c1 coding downstream 261048 25194743 ~ 25197196 (+)
cul4b cul4b coding downstream 268455 25202150 ~ 25214547 (+)
lamp2 NA coding downstream 281425 25215120 ~ 25231503 (+)
G107801 cstf2 non-coding upstream 70017 24857848 ~ 24859722 (+)
G107790 arl13a,LOC105925700,LOC102776915 non-coding upstream 111588 24813648 ~ 24818151 (+)
G107770 slc9a6 non-coding upstream 371500 24556621 ~ 24558239 (+)
G107709 NA non-coding upstream 501931 24427274 ~ 24427808 (+)
G107708 NA non-coding upstream 511446 24417591 ~ 24418293 (+)
G107818 trmt12 non-coding downstream 9855 24943550 ~ 24944540 (+)
G107819 NA non-coding downstream 11632 24945327 ~ 24945704 (+)
G107820 NA non-coding downstream 13043 24946738 ~ 24946942 (+)
G107821 NA non-coding downstream 13426 24947121 ~ 24947336 (+)
LOC120566737 NA non-coding downstream 172745 25106440 ~ 25107622 (+)
nox1 nox1 other upstream 82846 24840186 ~ 24846893 (+)
G107789 tmem35a other upstream 121038 24805200 ~ 24808701 (+)
arhgef6 NA other upstream 475826 24387484 ~ 24453913 (+)
LOC120566416 NA other upstream 1064465 23855525 ~ 23865274 (+)
G107487 mrpl11,LOC102790704 other upstream 1303450 23590328 ~ 23626289 (+)
apln NA other downstream 139518 25073213 ~ 25097023 (+)
rpl39 NA other downstream 345873 25279568 ~ 25282207 (+)
LOC120567498 NA other downstream 347253 25280948 ~ 25281080 (+)
sept6 sept6,LOC106945475 other downstream 357912 25291607 ~ 25310218 (+)
btk btk other downstream 1527593 26461288 ~ 26476570 (+)

Expression


Co-expression Network