trnav-uac_15


Basic Information

Item Value
gene id trnav-uac_15
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 24861970 ~ 24862184 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU144960
GCGGTTATCACGTCTGCTTTACACGCAGAAGGTCCTGGGTTCGAGCCCCAGTGGAACCAGAAAGTTATTTTCTGCCTACTCCTAATGATTGGCAGGAAATTAATTATCAAAAACCTCTCAGAACTTAGTAAGCACgtacaaatgtatttatatagtacTGTTCAAAACCAgggttacaaagtgcttcacacttACAAAAAC
>unassigned_transcript_475
GGTTCCATAGTGTAGCGGTTATCACGTCTGCTTTACACGCAGAAGGTCCTGGGTTCGAGCCCCAGTGGAACCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU144960 True 201 lncRNA 0.40 1 24861970 24862170
unassigned_transcript_475 False 73 tRNA 0.55 1 24862112 24862184

Neighbor

gene id symbol gene type direction distance location
cstf2 cstf2 coding downstream 2598 24846892 ~ 24859372 (-)
arl13a arl13a,LOC102776915,LOC103352893 coding downstream 41477 24815085 ~ 24820493 (-)
tmem35 tmem35a coding downstream 52037 24807285 ~ 24809933 (-)
cenpi cenpi coding downstream 56232 24791383 ~ 24805738 (-)
drp2 drp2,LOC107724836 coding downstream 72057 24582963 ~ 24789913 (-)
mid1ip1l mid1ip1,LOC104928730,LOC103352948 coding upstream 46712 24908896 ~ 24911419 (-)
tspan7 tspan6,LOC104955938,LOC107378166 coding upstream 50379 24912563 ~ 24918751 (-)
sytl4 NA coding upstream 66517 24928701 ~ 24942371 (-)
trmt12 trmt12,LOC106611794 coding upstream 81264 24943448 ~ 24948186 (-)
sash3 sash3 coding upstream 121309 24983493 ~ 24993304 (-)
G107880 NA non-coding downstream 20918 24840827 ~ 24841052 (-)
G107874 xkrx,LOC102776626 non-coding downstream 26622 24824081 ~ 24835348 (-)
G107855 taf7l,taf7 non-coding downstream 298339 24561203 ~ 24563631 (-)
G107772 NA non-coding downstream 318257 24543380 ~ 24543713 (-)
G107765 NA non-coding downstream 337381 24523123 ~ 24524589 (-)
G107885 LOC104956976 non-coding upstream 14638 24876822 ~ 24881870 (-)
G107887 NA non-coding upstream 20946 24883130 ~ 24883757 (-)
G107888 bcorl1 non-coding upstream 21816 24884000 ~ 24884256 (-)
G107889 NA non-coding upstream 22825 24885009 ~ 24885427 (-)
G107890 NA non-coding upstream 28117 24890301 ~ 24890716 (-)
G107864 LOC103353306,LOC105925836,LOC106916384,LOC103140164 other downstream 282871 24573441 ~ 24579099 (-)
rab41 rab41,rab6ba,LOC106515338,LOC106604734,LOC107696768 other downstream 873069 23884588 ~ 23988901 (-)
rnaseh2c rnaseh2c other downstream 1674912 23184192 ~ 23187058 (-)
trpt1 trpt1,LOC102777684 other downstream 1684944 23092565 ~ 23177026 (-)
G107284 LOC103374305,LOC102779018 other downstream 1727185 23129709 ~ 23134785 (-)
ndufa1 NA other upstream 400988 25263172 ~ 25264864 (-)
G107989 NA other upstream 417419 25279603 ~ 25288086 (-)
diaph2 NA other upstream 975146 25837330 ~ 26258199 (-)
rpl36a LOC106604455,LOC100304549,LOC100219516 other upstream 1595811 26457995 ~ 26460732 (-)
G108181 LOC103390578 other upstream 2127080 26989264 ~ 27001011 (-)

Expression


Co-expression Network