G116657


Basic Information

Item Value
gene id G116657
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 21270751 ~ 21326263 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU157251
TGGCATTTATTTCTCTAAAATGTTCTATGGGGGCTGGAACTGGATACAAAAAAACCACAATAGATGAGACAATATAGTGTCTTAAAATAGAGGCATGTGGTGTTTATTTACAATGTGAATAGCATTTACAATCTTGATAGAAGACAACAGGGATACACAGGTCAATGAGATGCCAGCACAGAAAACCATGAAACAAAAGTCAAGTCGCTGAATCATGTCAAAAGTCAAGTCCGACTATTCTTAcccacaaaaagaaaacaaacaaaaatattcaactaatctacaaaaaaaaaaaaatatatatatatatatataaaaatttcCCAAGCACAAAAGCAGACGTGGCATGTAACAATGTGAATAAATCCTGAATAGATTAAAGTCTGTGTAAATAATAACTCTTCTTTTTTGAGGATTTGCACCAGTGAACTCTTAGGCAAGGTGAAATAAGAGTTCAAAAGATAgacaaaaacatgatttatcAGACTATATCAGACACAGAAATCTATCAGATACATATGTAATATTAACTATTTTACTCTTTTAGATGTTCATCATTAGGTATATGTAGGTCTTTTGTTGGTTCATTATTTTCTTCAGTGGTTGATTGATTTGTCTGTATTGTTATGCTGCACCTTGATTTGCAGTTTACCAtagggtcttttttttttttccatactaCCACTAGAGGTTGCCAAAGTCAGTCTTAAATCTCACACAAAGCTTTAAGTATGCTTCAGTTTATTTAGTCACTGTACAGAGTGTTTGTCTCTATCTCTGTACTGTGACCATATTAGGACATCACAGTCTGAGCTATCAGGCTCTACTTCATCATTGAACGTTGCTAAATAAATACTATCAGGAATCCAAGTTGTAATTCAAAAGGATTCCTCTCCAGTTCAGGACAAAAGCATCAATACCAATATATCAGTCGGATATGTCCAAGACTTGTAGCAAAAAGCTTTCACATTGTAATTTCACAAGCTGACAATGCAAACTAGCAACAGCAatatacaacaaataaaatgaaaatttaaatagatttttatttcaaataaacATTGCATAATCAGCCACACTTGTGATTAAATACACTCAAAATAAGATGTATTTGCTTCTCTACTCACtcacagaaaaacaacacaagtaTTGTAAAGCTGTGCGGAAAACAAGTTATTTTGGCATGTTTCATTTTTCAGCTAGTGTGTTTCttaatttacagaaaaaaaaaaacaggaaaaacctatgtaacaaaaaaaaacatttcaggatGAAAACTTAGCACCTTGTTCCAGTCGCTGTGATTATTAGACTGGTGTATAGTGGATAAGAAACCATAGTAAGATGAGAAGGTTGGCCGCGATGACACCGGCCATTACAAGGCACACTCCTGCTTCTTTAGGATATTGAGGACAGTATAAATGTATACACCATGATAAGAAGCGTGCTGTCGGATGCAACAGGCTGACCCAAGATCTCAAAATCAGTTTACAACTCATCTTACGAGCCACATCCACAACTTCACTACATGCTTGATGCTATACACAATGACTTGCCAAAAGAATACTGTACATAGTATGTGCTGCTAAAACTGTGTAAGTAAATCCAACAGTTTACATGAAATGGCTTCTAAAAAGAGCAATTACTAAACCTTAATACTAAGGCACTGcttcaaataaaataagaaacatAACAGTGAGGTGTAAATGTGGAGATCGTCAAAGGAAATCAACTCCGTGCACAAAGCTGAGCTCCAGTGTCTCTACAACTTAAACTCACTGCACAAACGGACAGTGACCACAATACCCATGTAAGCATATTTAACAGtgtgacagagacacacacaccattctcTACAGGGCGGACTTTTACTGACCAGAGGTAAGAATGACCTTATGTGATTGACCACAGTGTTTCCAGGTGGGTCTACTGTAGACAACGACGATACAATACTTGCCGATGCTTTGCTTATACTGTCTATACAAACAACAAGAATAGGTCATTCCGGATGGAGACTCACTCAGTGTCCCTTTTGAGATCTGCACTTCCTTAAATGTAACTGATacaagtactgtatatatatacacacacacacacacacacacacacacacacacagg

Function

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function
GO:0043167 ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157251 True 2120 lncRNA 0.36 2 21270751 21326263

Neighbor

gene id symbol gene type direction distance location
guk1a guk1,LOC107100458 coding upstream 62067 21200717 ~ 21208684 (+)
arf1 arf1 coding upstream 74994 21192298 ~ 21195757 (+)
wnt3a wnt3a coding upstream 91920 21163720 ~ 21178831 (+)
snap47 snap47 coding upstream 211001 21053381 ~ 21059750 (+)
iba57 iba57 coding upstream 219409 21048354 ~ 21051342 (+)
zgc:92591 LOC103479695,LOC101468538,LOC101063387,LOC100696317,LOC105935710,LOC106963471,LOC103358166 coding downstream 101756 21428019 ~ 21428679 (+)
asb10 asb10 coding downstream 108704 21434967 ~ 21439933 (+)
gbx1 gbx1 coding downstream 115497 21441760 ~ 21444125 (+)
rb1cc1 rb1cc1 coding downstream 255017 21581280 ~ 21595237 (+)
st18 NA coding downstream 275789 21602052 ~ 21642496 (+)
G116616 NA non-coding upstream 26358 21243641 ~ 21244393 (+)
G116583 wnt9a non-coding upstream 136739 21129608 ~ 21134012 (+)
G116538 NA non-coding upstream 240255 21021631 ~ 21030496 (+)
G116529 NA non-coding upstream 241769 20949004 ~ 21028982 (+)
G116514 NA non-coding upstream 389755 20880692 ~ 20880996 (+)
G116723 NA non-coding downstream 128067 21454330 ~ 21500394 (+)
G116746 NA non-coding downstream 287837 21614100 ~ 21662470 (+)
G116794 mapre2 non-coding downstream 508203 21834466 ~ 21838752 (+)
G116857 NA non-coding downstream 609256 21935519 ~ 22020278 (+)
LOC120568180 NA non-coding downstream 698850 22025113 ~ 22036950 (+)
LOC120568904 crhr2,LOC101476678,LOC102776588 other upstream 355429 20882617 ~ 20915322 (+)
LOC120567833 gbg5 other upstream 895118 20373227 ~ 20375633 (+)
emilin2a NA other upstream 1805370 19447011 ~ 19465381 (+)
LOC120568770 NA other upstream 2218509 19017039 ~ 19052242 (+)
LOC120568911 NA other upstream 2545304 18720365 ~ 18725447 (+)
LOC120568354 NA other downstream 544690 21870953 ~ 21897391 (+)
LOC120567968 NA other downstream 1281786 22608049 ~ 22620131 (+)
LOC120568311 LOC103368946,LOC103142996,LOC106925933,LOC104929332 other downstream 1315247 22641510 ~ 22681293 (+)
kdsr kdsr,LOC102792240 other downstream 2107362 23433625 ~ 23440843 (+)
LOC120567964 dpp6,LOC100710983 other downstream 2266469 23592732 ~ 23685804 (+)

Expression


Co-expression Network