G117190


Basic Information

Item Value
gene id G117190
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 23377133 ~ 23378516 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU157950
GTTTCTTggcctcctctctttctttctcagcAGCTGCCTTCTGAGGGGTGAAGTTCCTATCCTTCATCTCCTTCACCATGCGCTGAGCATCTTCTAGCATCTTAGACAGGTTTTCATTGGGCATATTACCACTGGTGCCTGCATCCTTCAGTTGGTCCAGCAGAGCTTGGATTTTCTTGAGCATGTTTTGAATCTCTGAGTCCAGATCTTTAGCCCTCTTGTGGGTTTTTTCGATATCTGCCACCGCCTTGTCAGCATCAGCAGCCCTCTTATCTGcCTTGTTTTTGAGGGTGCTGATGTCATCTGACAGAGTGCTCACGTCGTCTTCCAGCTGGTTGACTCTGGACGTTTGGGTGTTGATGGCAGAGCTAAATCTGTTGACAAGAATCTTGGTGTCTAACACGGCCTTTTCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157950 True 415 lncRNA 0.48 4 23377133 23378516

Neighbor

gene id symbol gene type direction distance location
LOC120569134 NA coding upstream 33238 23325302 ~ 23343895 (+)
LOC120568373 znf521 coding upstream 74344 23212498 ~ 23302789 (+)
ss18 ss18 coding upstream 187562 23177741 ~ 23189571 (+)
LOC120568942 kctd1,LOC103479566,LOC103373355,LOC106534090,LOC108239680 coding upstream 229716 23134256 ~ 23147417 (+)
aqp4 aqp4 coding upstream 248181 23122523 ~ 23128952 (+)
vps4b vps4b coding downstream 44200 23422716 ~ 23433374 (+)
bcl2b bcl2 coding downstream 63075 23441591 ~ 23467811 (+)
glula LOC103366706,LOC100534445,LOC108239682 coding downstream 437524 23816040 ~ 23820441 (+)
trnaw-cca_13 NA coding downstream 489738 23868254 ~ 23868325 (+)
gigyf2 gigyf2 coding downstream 491535 23870051 ~ 23890968 (+)
G117187 NA non-coding upstream 2934 23373710 ~ 23374199 (+)
G117128 NA non-coding upstream 459027 22917876 ~ 22918106 (+)
G117082 dsp non-coding upstream 622643 22752252 ~ 22754490 (+)
G117077 NA non-coding upstream 629401 22747120 ~ 22747732 (+)
G116978 NA non-coding upstream 904293 22465335 ~ 22472840 (+)
G117219 NA non-coding downstream 67835 23446351 ~ 23462300 (+)
G117220 NA non-coding downstream 90104 23468620 ~ 23519769 (+)
G117221 LOC101467149 non-coding downstream 94031 23472547 ~ 23473684 (+)
G117228 NA non-coding downstream 114590 23493106 ~ 23566317 (+)
G117297 LOC104918287,LOC103479586,LOC107686770,LOC108443834,LOC107083372,LOC106929027,LOC108239658 non-coding downstream 363968 23742484 ~ 23745977 (+)
LOC120568311 LOC103368946,LOC103142996,LOC106925933,LOC104929332 other upstream 695840 22641510 ~ 22681293 (+)
LOC120567968 NA other upstream 757002 22608049 ~ 22620131 (+)
LOC120568354 NA other upstream 1479742 21870953 ~ 21897391 (+)
LOC120568904 crhr2,LOC101476678,LOC102776588 other upstream 2461811 20882617 ~ 20915322 (+)
LOC120567833 gbg5 other upstream 3001500 20373227 ~ 20375633 (+)
kdsr kdsr,LOC102792240 other downstream 55109 23433625 ~ 23440843 (+)
LOC120567964 dpp6,LOC100710983 other downstream 214216 23592732 ~ 23685804 (+)
G117319 LOC101487892,LOC104941256 other downstream 472363 23850879 ~ 23855157 (+)
G117353 LOC103366712 other downstream 527354 23905870 ~ 23908401 (+)
hes6 LOC104918282,LOC104941260,LOC103366710 other downstream 534148 23912664 ~ 23914498 (+)

Expression


Co-expression Network