LOC120568242 (LOC103358295)


Basic Information

Item Value
gene id LOC120568242
gene name LOC103358295
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 35822425 ~ 35830257 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640690.1
GAACTGGCCCCAGGCAACCAATGGGAGAAGACTACAGCCGAGTAGAACTGGCCCCAGCCAACCAATGGGAGAAGACTACGGCTGTCTGGACTAGATGAGTCTACATCGCAAAGGCAGTGAAGTCATTCAAGATATTCAGTCATGATTCAGAGCAACGAGATCAGCTGACAGACTATGGTGCAGAGGAGCGGGACCTCCTGCTAGACCACAGTCTTAACAAGTCTGGCCAGAGAGGACTATCAATCCATGAGGACATTCATCTTTAGGAACTACATGGACAAGTCTTACCATGCCTTCTGGGAGATGATGGTAACAAAGTTGCCATTCTGCTCCGATTACAAGAACATCCTACATCTTGTGCACATCATGCTGGTCCTCCCGGTCTCCTCGGCTGTATGTGAAAGGGGATTTTCTGCTCAGAAGAGGATTAAATCTG

Function

NR:

description
PREDICTED: uncharacterized protein LOC103358295

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640690.1 True 436 lncRNA 0.49 4 35822425 35830257

Neighbor

gene id symbol gene type direction distance location
LOC120567707 LOC106910133,LOC107834262,LOC106939220,LOC107373952,LOC104944801 coding upstream 378612 35431679 ~ 35443813 (+)
LOC120567912 NA coding upstream 559523 35261558 ~ 35262902 (+)
LOC120569116 LOC107667722 coding upstream 653709 35165658 ~ 35168716 (+)
LOC120568812 LOC102310619,LOC100692846,LOC108280567,LOC105903927,LOC106524909,LOC108427173 coding upstream 997604 34809892 ~ 34824821 (+)
trnam-cau_26 NA coding upstream 1046276 34776078 ~ 34776149 (+)
pold3 pold3,LOC107703443 coding downstream 618780 36449037 ~ 36463662 (+)
LOC120567713 LOC107092464,LOC101065262 coding downstream 735504 36565761 ~ 36583870 (+)
LOC120568503 LOC100700741,LOC103361717,LOC101470268 coding downstream 758397 36588654 ~ 36620596 (+)
LOC120568504 LOC103361716 coding downstream 793820 36624077 ~ 36710812 (+)
LOC120568506 NA coding downstream 906891 36737148 ~ 36747668 (+)
G120575 NA non-coding upstream 46202 35775960 ~ 35776223 (+)
G120568 NA non-coding upstream 62197 35759693 ~ 35760228 (+)
G120552 NA non-coding upstream 143459 35678592 ~ 35678966 (+)
G120549 NA non-coding upstream 157032 35665169 ~ 35665393 (+)
LOC120567666 NA non-coding upstream 163180 35655949 ~ 35659245 (+)
G120611 NA non-coding downstream 58389 35888646 ~ 35888885 (+)
G120613 NA non-coding downstream 59629 35889886 ~ 35890255 (+)
G120675 NA non-coding downstream 358076 36188333 ~ 36188558 (+)
LOC120568724 LOC107386814 non-coding downstream 374294 36204551 ~ 36206241 (+)
G120678 NA non-coding downstream 391162 36221419 ~ 36221770 (+)
LOC120568940 NA other upstream 180392 35594878 ~ 35642033 (+)
pde4ca pde4c,LOC101063915,LOC100693394,LOC102791393,LOC102313416 other upstream 1130805 34624276 ~ 34691620 (+)
pik3r2 pik3r2,LOC102792547,LOC100693657 other upstream 1214669 34569394 ~ 34607756 (+)
G120249 rps15,rig,rs15 other upstream 1364814 34453722 ~ 34457611 (+)
rps28 NA other upstream 1418424 34400748 ~ 34404001 (+)
G120716 NA other downstream 574983 36405240 ~ 36405773 (+)
G120717 NA other downstream 575864 36406121 ~ 36406689 (+)
LOC120568208 LOC103361715,LOC100701557,LOC100700197,LOC101469035,LOC102215562,LOC102289753 other downstream 1049661 36879918 ~ 37087443 (+)
G120914 LOC103396775 other downstream 1472637 37302894 ~ 37306014 (+)
LOC120568367 LOC103371210,LOC101487706,LOC100534480,LOC102208811,LOC102309261,LOC104937382,LOC106522909 other downstream 2159308 37989565 ~ 38019068 (+)

Expression


Co-expression Network