LOC120568744


Basic Information

Item Value
gene id LOC120568744
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 22307767 ~ 22314947 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640771.1
CAGATTTCAGAGAGTAGCAAAACCACTTCAACGACAGCAGTagtgacacacagagaaaacaaagtGTATCCTAGAACAGGATGAGGTGATGGGATGCAGGCTTGGGACAATACGCGCTGCTATCGTGTTGTATCAATTACAGCTGACCACCAGTCAGGTGGGTCTGCGGGACATTTTAGATCACGGAGGGGCAGCCAGCTCGCTCAGCGCCTCCAGCCTGCTCCCAGACTCCAGTCCCAGGTCCCGCTGAGGCCTTGTCCCAGGCAGGGCAGAGAGACACCTGGCCAAACCGCAGAAACACTTCCAGCTGCAGACTGCCTGATGTTCACCACGGAGAGAATCCAGGCCAAAGGTGGAGGAGCTCACcgagaactacttcactaccaTAGACATTTCTCAgaatttcatgttgtttattttaaccACAGTACCGAGCATTTGCTCATCTGTTGAGGTTCAGAAATGTAAGGCATGTCTTTATTAATTTCCGGAGCAAACCTTTTTATTGTCAAAATGTTTACACTGTGTAACAATAAAAGTCTCCTTCCTccccaaaatggaaaacaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640771.1 True 568 lncRNA 0.48 2 22307767 22314947

Neighbor

gene id symbol gene type direction distance location
LOC120568797 NA coding upstream 39208 22257208 ~ 22268559 (+)
LOC120568851 NA coding upstream 81641 22220708 ~ 22226126 (+)
gpaa1 NA coding upstream 97029 22204495 ~ 22210738 (+)
exosc4 exosc4 coding upstream 103574 22201552 ~ 22204193 (+)
prkacbb LOC102779523,LOC103396312,LOC107383895,LOC108239664,LOC105935432,LOC104931534,LOC100699977,LOC101066292 coding upstream 107119 22189167 ~ 22200648 (+)
ripk1l LOC103479635 coding downstream 172890 22487837 ~ 22495325 (+)
mep1bb mep1b coding downstream 201331 22516278 ~ 22524115 (+)
LOC120567970 NA coding downstream 308582 22623529 ~ 22632195 (+)
LOC120569076 LOC103371152,LOC102785856 coding downstream 372147 22687094 ~ 22688773 (+)
LOC120568105 LOC104949489,LOC103371148,LOC105899400,LOC102785858,LOC107708605 coding downstream 449705 22764652 ~ 22804767 (+)
LOC120568856 NA non-coding upstream 69262 22234819 ~ 22238505 (+)
LOC120568180 NA non-coding upstream 270817 22025113 ~ 22036950 (+)
G116857 NA non-coding upstream 287489 21935519 ~ 22020278 (+)
G116794 mapre2 non-coding upstream 469015 21834466 ~ 21838752 (+)
G116746 NA non-coding upstream 645297 21614100 ~ 21662470 (+)
G116978 NA non-coding downstream 150388 22465335 ~ 22472840 (+)
G117077 NA non-coding downstream 432173 22747120 ~ 22747732 (+)
G117082 dsp non-coding downstream 437305 22752252 ~ 22754490 (+)
G117128 NA non-coding downstream 602929 22917876 ~ 22918106 (+)
G117187 NA non-coding downstream 1058763 23373710 ~ 23374199 (+)
LOC120568354 NA other upstream 410376 21870953 ~ 21897391 (+)
LOC120568904 crhr2,LOC101476678,LOC102776588 other upstream 1392445 20882617 ~ 20915322 (+)
LOC120567833 gbg5 other upstream 1932134 20373227 ~ 20375633 (+)
emilin2a NA other upstream 2842386 19447011 ~ 19465381 (+)
LOC120568770 NA other upstream 3255525 19017039 ~ 19052242 (+)
LOC120567968 NA other downstream 293102 22608049 ~ 22620131 (+)
LOC120568311 LOC103368946,LOC103142996,LOC106925933,LOC104929332 other downstream 326563 22641510 ~ 22681293 (+)
kdsr kdsr,LOC102792240 other downstream 1118678 23433625 ~ 23440843 (+)
LOC120567964 dpp6,LOC100710983 other downstream 1277785 23592732 ~ 23685804 (+)
G117319 LOC101487892,LOC104941256 other downstream 1535932 23850879 ~ 23855157 (+)

Expression


Co-expression Network