G125114 (slitrk5,LOC100690770)


Basic Information

Item Value
gene id G125114
gene name slitrk5,LOC100690770
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 18845407 ~ 18851795 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU168279
CCTAGGCCTGTTCTGTGACTGATATTTGCGCAGCTGTTTGAACGCTTAAGGCATTAGATAatcatttaatttatacatgaGAGAATTGATCATTTGAGCAAAACTAAAGCACCATACAGTATGCCATTTCAATGTTGATTATGCAACACAGCCCCTTTCGTTAATTCCCATTTGCCTAATTGAAACCATGACAATGGGCTTGATCTTAACATTTGAATTGGGTATTGTAATTTTAGTAATGTTCTGAAAAATGCCAATGGGGTTTTGTGTAACATTTTCAAAGCTGTCCTCCATGTGCACTATGATATTTACTTCACACACCATGGTTTAGAAGGGTGAAGGGAACACAGAAACACTGGCATATGAATGCATATCTTTTATTCATCAGCTAACAACTaaagaaacagcacattgtagaTATATTTACCCCACATACAGTATTCCTAGTTGTACTGTGGTTCTGCAATAAGAGACCAGTTTTTTGCTTTTCAGAGCCAATGCAAGTTTGCATGGAAATGCTGAAGTGTTCTATTTACAAATCAGAGGATGACATAGAAAACCACTGTTTCAtattaaaatacaaacaaaacaaacaaaagcaaacatAAATGTTGGAATAAGAATAAGACACTAACTGGATCTCTTCTTCTTTGCAAATTAAACATTTGCACATATGCACAGGATAGTCACATTTCaatttaaaggtgccgtaggtagaaTTGCAAAGAGCCAggacttggaaaaaaaagtgaacatcgacaacttctcagttcctcccccctttccgctaaagcccaaagggagaatgaatgcctgtgcatgagcagtgattgacacgcagttagacaccccccctggccatgattggtgcatctgaacagggagtggtggatttttgcaactcgcactacaggctgtaggtggtgcccgaggagccacatttttttttattacctgcttcatgtagttctactcgagcatagggtcagtttcagcaaatatgacagaaagttagttttataaggcttacctactgcacctttaacataTTTTTGGATTATCAGTATTTGCAGTCTCACGTGTGACAAATATCGGCATTTGGTCATTGATAACAAAAAGCTGAAAGAGCAAACATTACAAATGTCTGTTATATACAGTAGATACTCTTTTCCATTACGCAGTTGCAAGATTCTTAAAAATTGAAAGAAAcatcatgaaaaataaatgtgtccGATTTTCCTTCAAATACACTGACAAcctaaattattttcttttttgtgatgCGCTATTTTTTAATCTGTTGCATTAGCTTGGTTGCACACAATTtaccacacatttaaaaaatatatatattattttcagaACTGAAACAATTGACTAAATGTCGGCCACTGctcacaataaaaacattttgtctgTGCAGGTTTACAGTGTTTTCACCACTGACTTCACAGCAAtatattgattaaaaaaaaatccatcaaaCAAAGTACGAACCTGTGCAGGTTTATATAATGCTGCACTGTGTTGacttcattttatttcttctgATGAATTTCCAAAGGGCAGACACAGTTCAAATGATAAAATAATCACAACATGACTCTGAACACGTGAAAGGCAACAAACCAAGACTGTATACTTGATAAACAGCATGACTAATGCTGCAGTGTAATACACGGTGACATGCAGACAGGGTCCAAATACACCATGTCCTCTAATTAGCTGAGTTAAGATGATAAGTTCAGTGCATAATACTGCATATGAGGTGAATTTACTTTGTGTATAAAGTCTGATTGCTAGGTGTATACTATTGACCCAGAAATTGGTTTGACTGCATTATGACTGGATGATGCgtatacatattttttatgaattagACAACTTTATCCATTCAAGCATGTATTTGTTGTGCATTAATCTAGTAGCTAAAGCTCTTGCAGACCTTTGCACATTTGTTACACTACCAATAACCCCCCCCCCGttaaaaggagagaaagagacactaCTAATTGCAGTCAAATTTCCAGATTTCATGCGCCCAcagatgaaaacaaacaatgcCAAATAATGAGACATTGTTTTTTCATTGtgatgcaacacacacacacacacacacaaatccactCAGTGTTCCCCTTAAAACACgtgtaattaaaaatatataaagttttagaaaaaaataattatccaAAATGTGGTTCAAAAGTAcctctgaatattcatgagtgttacattttaaataaacatttatagGATGTgataatattattaaatatcATGTTTATGAGTGTTGGTTGGTGACCGAGAGGATGAGCTGTTGGCATTTTGTACAGATTGTCTAAGTATACTCTATATATCTATGCATAGTGCAAGCGTTTTTAACATGTGGTACTTTTATGTATACACTTTATCAAACCTACTTCTATGGCTATATGCACATGTGTTACCAAATTGTACATTTCAGAAAGTGACATCATTGTTAACCTGTAGAAGTCAATAGTGCATTTtttgtaaaagaaagaaaagaaagttgcATAAtatgcagtcatttaaaatatgttttgggCCTGAGGCCAATATATTTTCAGCTGAATATCAAACAGAAGTATATGGAGATAGATAGATTAGACTCTTATTGTATTGCAAATCTACTCAAATGTATTGCAACTGGAAAACAATTTTTGTAAGGGTATTCAGAGatatattaaagaaaaaaaggttgtaaTGGTACAATAAAACACAGGAATGTGCTTTGATGTACTCCTCTGAGTGGCAAACTTTGCATATATTATgagctgattttttttgtgtactttGGTTGTGGTACAGATAAATTTAAGACACTTATTCCAATTCATCCTTTTTCGACAAGTGTGTTTTCAAGCTGTATGTTTGCcagaaaatacataattttGATGCATGATATAGCCTTTTAAAGCTCATTTTCTTTCAGTTACAATACATCTGGATATGGCTGTGATTATAATCTTTTAGTTACAACATTTCTGAGTACAGTTACAATACATTGATATTTAACTAAATACAAGTGCAACATGTGTCCATACTCCACAAGTGAGTTGGTTTGGAGATGGGGAGGCTCCGAGGGAACACCACCGATTACTTATGTCTGTTCAGTATATTTTTAGGATACATTAATTATTCTCTCCCAAATCTGCAAACAAGAGATCAGAGATTTTCTGGCCTCATAATCTGTGATTTGAGATATTACATTGGAATTAGTTTTGTGATCTCATACATTTAATATGATCATCCCAGAGCTGTGCATTCTGGAGGTAAAACTGCCTCCCTAATGTGTCTGACTCCATTTTTCCCTGTATTACAGTTTCCTAGATGCGTTTACAGACTAAATTTGATTTAATCTCATGTGTGAGTTTCATCTTCAATAAATTTGACAGAACTGGGTGCCATACTtataactgtaactgtaaaaaacaacaagaacATATCATCtagggtgcctgggtagctcacctggtagagcgtgcaccccatgtacagaggctcagtcctcaccGCAGCGGCCGCATGCTCggttccaacctgcggccctttgctgcatgtcgtccccctctctctctcccctttcatgcctaaatctgtcctatcaaataaaggccttaaaagcaaaaaaaaaaatcacctttaaaaaaaaacatatcatcTGGATGCTTCATGAACACTCATGAAATGCTGCTAATTTGAGAGTAAAAGCTCAGTCACATTATTGTTAATGAAACAAGCTCCAGGATGTATTTTATGTAGGGATGAGTCATAATAGCCTCAGATTTCTGGTTACTTGttcatatttacacatttaaacCAAACTGTTAAACACCACAGGGGTAAAGGGATAAGTGATACTTTAAAATTAGTAGTTTTATTATTCCATCATGTGACAGAAGATTCCCAGAAATGCTCACAATGTATTGTACAAATAAAGGTGATAAAGTAGTTCTGCCTGTTTTTTAAACATGGTCGGATTCCTGATAAAAAAAAGGATACATTACATCAATGCATCCACGCTGACCGTCCACATATCAAGTCTCCTAAAACTGTGTAAATGTTGTTCGTTTTTCAAGAACCTCAAGGTAATCGGGATCAATATGAAGCTTTGCTTTCAGTTCCCAGTACTCACTCCTGTTGGGCTCCACATATACAGTACTTGGTGCACAATAGAGTATTGTCTGTTGTATCCTATCTGGGTGCATGTATTGATGCCTTGCATCCAAGTCTGAGGTATACTGACTTGACGAATGCGCCGCATGCCTGCATGGTAATGTATTGCTGTAGCGTGTGTGCTTGTCAGGCTCATGTACATCTCTGTAGTAACACTGATCATCTTGGTAAGAGCTGGAGGGCTTGCTAGGTGGCTCTGGGGTGGTGGCACTATATTCCGAGCTTATTACATTACTGGCTGCCTCTTCGTCCGAGTTACCCAGAAAAGCGCCGCTCAACTTGTCAAAGTCTCTAAATCCATCCGTTGATTTGCTGTCCGTCGGTGTTTGGGCAGAAATTCTGCATGTGGACTCTGTGGGAGGTGGTATGTACTCATATACATGTCCAGCAGATGTTCTGACTTTGGGAATGGATCCCTTTTTGTAAAGGCCATATTCCATGTTGAGAGAGCTAATGCAAGCATTCATGGAGTTATTGTGCTCGTTTTGACTCTTTTGATGTCTCTTTTTCATTACCACGAACAATCCTGCAgccacaaacacagacacaatgaACATGAAGAGAAGGGCAAGAATCATCACAGACAAAGGAATGGCACTGTATTGTGTGTCAAAGTCCAAAGATGTTTCTATGGTGATAGTGCTGCCTGGAAAAGATTCTTCAGAGGGTGGGATCATGGAGGCAAGTATATCAGAGTTATTAGGGCAGAAATTAGCTGTCTTAATGTATCTCATATCCTCCCCAGCTAGCCTTTTAGGCGAACCACAGATGACATTGTTTACAACCGTGCCTGTGCTAAGCTGCTCCAGCCACATCTTCAACTCCAGTATGCTACAATAGCAATCCCAGGGGTTCTCGAACAAATCAACTTGCACCAGTGCCGTGAGCTGATCTAGCACGCCGCTGACAGGCAGATATCGCAGATGGTTGCTGCGAAGATTTAGTCTGGCTAATGTCAGGCCATTAAATGTTCCCACTGGTAAGGTTTTCAAGAGATTATTGTTCAGGAAAAGAAGCTGAAGTTTGGGTACATGCTGAAAGGTGTCAGAAGCAATTTCTTTAATGACGTTGTATTCTAAATATAAGAACTGTAGGGTCTCCAGTCCATAAAACATCTCAGCTTTAAGATGGTCAATCAGATTTCCGTTAAGGTATAGTCTTCTTAGGTGTTTCAAATCGCCAAATGTTCGATCATGTATGCGAGAAACTCGATTGTTACCAAGATGAAGCAAATCTAATCCAGTCGCCTCAATAAAATCTGACCGACGCACCACAGGGATATAATTCCCAGTTAAATACATCTTTTTGGGATTGTAAGGTTTGGGATGTAAGTCAGAGATATGCTCAATCTTTCGCTCCTGACAGTTCACATTCAGGCCAAGGTCTGAAATTTGAAGGTTGCAGGTGCAGGCAGTTGGGCAATCTAAAGGCACAGGGGATTTGGTTTGATATGAAATAATCTGGCCATAATTCTGTGGTTTATTAGATGGGATGCGAGCAGTGGGCCTTGATTTTAATTTGCGTGACTGGTGGGGTCCCTTAGTGGGTCTTGATGAGGACCGTGCAATCCCAGATGAGGTGAAAGAGGCTGTGACATGAGCTGGCGTAGTCCTATAGTATGCATCGGTGCTCAAATGTGGCAGGGGTTGCATCTCGTATTCAGCAATGGCTCTCCTCGGGCACAACTCCTGTTTTGAAACCTCATCAAGATCTCTCCCGTGAAGCCGGAAAGGGAACTCACAAACAACATCGCCGACTAAAGCTGTGTATGATATGCTCTCGAGCCAGGTTTTAAGAGCGATCAGCTCACATGAACAGTTCCATGGGTTCTCCTCCAGCTGTAACTCCACAACACTGTTCATGTGCTCCAGCAGACCTGAGTAGGGTAGCACTTTGAGCTGATTCCCCCTTAAGTCCAAATGAGTTAATGGTACATACTGGAAAATGTTCACAGGCAGAGAAGATATTAAGTTGTCATTTAGAATCAGGACCTCCAGATGTCGAAGTCTGCTCAAGGCATTCGGCGCAACATGAGTGATATAATTGTAATCAATTTGTAGATATTCCAGACTTTCAAGGCCAAAGAAAATCTCTTCCTTCAAGGCATCAATTTTGTTATTGTTGAGATGCAATCGTTTTAATTCCTGAAGTCCATTAAAAGCTCCTGCTTCGACTTCAGATATCTCATT

Function

symbol description
slitrk5 Predicted to be involved in axonogenesis. Predicted to act upstream of or within several processes, including grooming behavior; nervous system development; and positive regulation of synapse assembly. Part of receptor complex.

NR:

description
PREDICTED: SLIT and NTRK-like protein 5 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU168279 True 6389 lncRNA 0.39 1 18845407 18851795

Neighbor

gene id symbol gene type direction distance location
dct dct coding upstream 142855 18695106 ~ 18702552 (+)
sox21b sox21 coding upstream 167925 18675287 ~ 18677482 (+)
LOC120570426 abcc4,LOC103357783 coding upstream 193740 18611360 ~ 18651667 (+)
uggt2 uggt2 coding upstream 264377 18535567 ~ 18581030 (+)
LOC120569834 ino80d coding upstream 611672 18224248 ~ 18233735 (+)
si:ch211-199f5.1 LOC104947498,LOC103352952,LOC100689962 coding downstream 75748 18927543 ~ 18931474 (+)
cnmd LOC103352944,LOC102292237 coding downstream 79625 18931420 ~ 18935948 (+)
LOC120570212 NA coding downstream 96124 18947919 ~ 18953681 (+)
LOC120570209 NA coding downstream 104898 18956693 ~ 18962174 (+)
frmpd4 frmpd4 coding downstream 190356 19042151 ~ 19076783 (+)
G125110 NA non-coding upstream 15499 18829619 ~ 18829908 (+)
G125109 NA non-coding upstream 15881 18828933 ~ 18829526 (+)
G125104 NA non-coding upstream 16494 18828686 ~ 18828913 (+)
G125101 NA non-coding upstream 17047 18827860 ~ 18828360 (+)
G125098 NA non-coding upstream 29350 18815539 ~ 18816057 (+)
G125115 NA non-coding downstream 771 18852566 ~ 18855030 (+)
G125266 NA non-coding downstream 615637 19467432 ~ 19468790 (+)
G125267 NA non-coding downstream 639743 19491538 ~ 19586655 (+)
G125274 NA non-coding downstream 699563 19551358 ~ 19551941 (+)
G125369 NA non-coding downstream 896271 19748066 ~ 19814268 (+)
LOC120570507 NA other upstream 17860 18818753 ~ 18827547 (+)
G125079 NA other upstream 140879 18703028 ~ 18704528 (+)
hnrnpa3 hnrnpa3 other upstream 827994 18010757 ~ 18017413 (+)
hoxd10a hoxd10,LOC102792757 other upstream 964079 17860160 ~ 17881328 (+)
myo3b myo3b other upstream 1646817 17127881 ~ 17198590 (+)
tmsb4x NA other downstream 237623 19089418 ~ 19090785 (+)
igsf3 LOC103352919,LOC104967650 other downstream 536220 19388015 ~ 19459274 (+)
LOC120569357 LOC103369896,LOC102289365,LOC102197623,LOC101484406 other downstream 1116565 19968360 ~ 19993324 (+)
myo16 myo16,LOC103372229 other downstream 1302060 20153855 ~ 20265590 (+)
G125627 LOC108259060,LOC105016494,LOC108266561,LOC104955100 other downstream 1640383 20492178 ~ 20521274 (+)

Expression


Co-expression Network