G125738


Basic Information

Item Value
gene id G125738
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 20795045 ~ 20825545 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU169119
aaagaacatttaaaaatgtatgtcttGTGTCGGAATGAATGGGCTTTGTGCTGTGTGCCACATACAAAGTGAGGAATTTGTAAAGTATTGAGAGACGGACTAatgcattgttggttttggtcttattaAGACAGACAGCCTACACTTTGGTTGAGTCTTACTCACGGTGAGCAGGTCATACTGCAGGACATTAGTGGTACTGAGTCTGTGTCCCTTCAGTTAAGCACTAGTGCTtgtagaatagaatagaatatctttattgtcattgtaacaGATACAACGGAATTAAGTGCAGTCCTTGTCAGTGCCAAACATCTATGAGGTATATgcctaaataaatacataaataaaaaatgctacTGCAAACATATTGTATTAATGCtaaaaacacatgggagacacaCTCATACAGGCATTCAAACATTGCACATAGCCCTATTGAGATAGATCAGTGGTGGGAACTATACTTGAGCAGCATTATTCAATGCACTTACGGCTGTTGGATAAAAGTTGTTTTGTGGTCTGTTTGTTCTCGATTTCATGGACCTGTATCTCCTGCCTGACGGCAGTAGTTGGAGCAGTGTGTGACCGGGGTGGGATGAGTCCTGTAGGATGGTTTGGGCCTTTTTGAGGCAGCGGGGGCTGTGAAGTTCTTCCAGTTATACATGAACTTCACTGCAGGTCGAGGTACTGAGGTAGAACGTTGTTCCAGAACTGCTGAGAGTCATCTTGTTTCTTCACTCCAGCACTCTGCTTTGTCCTCGGTGCTGGTTTGGGTGCTGGTTTGGGTGCTGGTTTGGGTGCTTCTTTCTGTTGTTTGTCTTTTCTGTCAGGAGGCATCTtctgtatgttttttgtttttgatgatttgaccttttcctcctcctcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttctttttttctctctttaacaataaaattaaagcatTCTCCAAGTATGTTTTTACTTAAAGTCCTTGTTTACATGCGCAACTGCCGGAGCAGGACATCAACATTTTTTAGCTTTGTGCtacaaattcaaaatgtcaCACGTTAACACTGATCAAAGCTCACTTTCTCCTAACAAAATAATATTGCACTTAACATCCTTGCACACCAGCCACCATTATTCTCACActtaatatatatttactgACATCCTTGCCTGTTGCATTCACACAGATGTAGTTTATCCTCATACAGAAACATCAGTAAGAAAGtcatcttaaaaaaacacaggGGGGCTAGAAATGACACTAATTAGTATTCTACACTATACTTGTACAAATCTCAGGTTTTTTTCAAGTGCTATACagcaagaaaaaaatgttttctttaaaatacattgcCAGCAGGCTACTGCTCATCCTCATTTTCCTGTCCTGAACCTTCAGAGCGATCACCTTCTAGTCGatctgcaagaaagcaaaagCAGATATTAAAAGAGGGACAGATAAACCAGAAGGTTTAGAAGGAAAGTCCTAAGAAAAACGGTGTCTGTGCACATTGTGCATTAATATTCAAACTATTTGcatgaattaaaaacaaaagtgagTTTATGTTTGTGTACCTGATCTGATGTGATTTAGGGAGGCC

Function

GO:

id name namespace
GO:0007275 multicellular organism development biological_process
GO:0048856 anatomical structure development biological_process
GO:0009790 embryo development biological_process
GO:0044424 obsolete intracellular part cellular_component
GO:0005622 intracellular anatomical structure cellular_component
GO:0005634 nucleus cellular_component
GO:0043226 organelle cellular_component
GO:0043227 membrane-bounded organelle cellular_component
GO:0043229 intracellular organelle cellular_component
GO:0043231 intracellular membrane-bounded organelle cellular_component

KEGG:

id description
ko04950 Maturity onset diabetes of the young

RNA

RNA id representative length rna type GC content exon number start site end site
TU169119 True 1623 lncRNA 0.39 2 20795045 20825545

Neighbor

gene id symbol gene type direction distance location
sytl5 sytl5 coding upstream 20390 20738792 ~ 20774655 (+)
xk xk coding upstream 60760 20724860 ~ 20734285 (+)
asb11 LOC104950685,LOC102779537,LOC102313943 coding upstream 84345 20707241 ~ 20710700 (+)
piga piga coding upstream 89041 20699231 ~ 20706004 (+)
gabpa gabpa coding upstream 145879 20641212 ~ 20649166 (+)
cep97 cep97 coding downstream 40390 20865935 ~ 20871334 (+)
nxpe3 nxpe3 coding downstream 49847 20875392 ~ 20885262 (+)
pou2f1b pou2f1 coding downstream 112023 20937568 ~ 20953570 (+)
lamp1b LOC104951941 coding downstream 145751 20971296 ~ 20976876 (+)
tfdp1a tfdp1 coding downstream 170968 20996513 ~ 21007034 (+)
G125718 NA non-coding upstream 81851 20712406 ~ 20713194 (+)
G125702 NA non-coding upstream 107998 20686697 ~ 20687047 (+)
LOC120570651 NA non-coding upstream 115969 20667680 ~ 20679076 (+)
G125675 LOC106940919,LOC102232862,LOC103459816 non-coding upstream 143176 20649273 ~ 20651869 (+)
G125662 NA non-coding upstream 163851 20594040 ~ 20631194 (+)
G125749 NA non-coding downstream 6949 20832494 ~ 20835754 (+)
LOC120570516 NA non-coding downstream 78449 20903994 ~ 20911358 (+)
G125826 NA non-coding downstream 128192 20953737 ~ 20958039 (+)
G125825 NA non-coding downstream 133162 20958707 ~ 20959962 (+)
G125892 NA non-coding downstream 365487 21191032 ~ 21191666 (+)
G125627 LOC108259060,LOC105016494,LOC108266561,LOC104955100 other upstream 273771 20492178 ~ 20521274 (+)
myo16 myo16,LOC103372229 other upstream 529455 20153855 ~ 20265590 (+)
LOC120569357 LOC103369896,LOC102289365,LOC102197623,LOC101484406 other upstream 801721 19968360 ~ 19993324 (+)
igsf3 LOC103352919,LOC104967650 other upstream 1335771 19388015 ~ 19459274 (+)
tmsb4x NA other upstream 1704260 19089418 ~ 19090785 (+)
mpc2b mpc2 other downstream 27544 20853089 ~ 20858916 (+)
G125757 rpl24 other downstream 34607 20860152 ~ 20865442 (+)
sox1a LOC103372296,LOC101481640,LOC100691128 other downstream 793803 21619348 ~ 21634757 (+)
LOC120569986 LOC103372298,LOC100698342,LOC102199663,LOC102299751,LOC101469554,LOC102782232 other downstream 829581 21655126 ~ 21691804 (+)
fbxl3a fbxl3 other downstream 1905378 22730923 ~ 22738653 (+)

Expression


Co-expression Network