G125892


Basic Information

Item Value
gene id G125892
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 21191032 ~ 21191666 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU169327
ATGTTGCTGAACTCTGCCATTTGAAGTGCAGTTTCAAGGCGTTTTGGCGGTGTGGTGTCCACAAGCATCTGCCGCCTCAGCTTGCGGCACCAACACCGCGCCGGCGTGCACTGTGATTCTTTAATTCTCTAAGGGGACTTTTCTCTTGTTGCTGCATaaagatattttaatttttcttgATATTCGTGTCTGGGCTGAAAGTTGTGCGCTCCCTGGCATCCGCACCTGTTAGAGGCCAAtgctagcctgggaaaaccctgacgaacttccggcaaatttgagatttgctctgcaagtcagtctggccaagagcccattcaagcccatttccaatttttccaaatcgaggcaacAATCACAACCCAGCGCAGCAAcctgttgatgccgctgtcgtttcatttattatacaggaaaatTTAAAAGCAACAATGAAGTTACAATaaactggtttccagcaggttcctgttctgcagcaacATAGAACGTTGAACACAATTTCGGCACATTTATACAGGACATTATCATGGACTAGAcagatacaaacaaataaaacattaaatacgGACAAACAAGACTAAAAACAATACATGAACAATCAATGTGTGCAAGTAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU169327 True 613 lncRNA 0.44 2 21191032 21191666

Neighbor

gene id symbol gene type direction distance location
LOC120569870 st6gal2 coding upstream 66590 21072178 ~ 21124442 (+)
jam2b LOC108232408 coding upstream 156218 21025242 ~ 21034814 (+)
LOC120569739 LOC103352901,LOC102791869,LOC102207044,LOC101487838,LOC100703644 coding upstream 177699 21008677 ~ 21013333 (+)
tfdp1a tfdp1 coding upstream 183998 20996513 ~ 21007034 (+)
lamp1b LOC104951941 coding upstream 214156 20971296 ~ 20976876 (+)
LOC120570592 fhl2,LOC104956538 coding downstream 77587 21269253 ~ 21274628 (+)
mfsd9 mfsd9 coding downstream 153866 21345532 ~ 21352657 (+)
inpp4aa inpp4a,LOC106581879 coding downstream 178154 21369820 ~ 21386556 (+)
si:dkey-4e7.3 LOC103368133 coding downstream 206864 21398530 ~ 21406901 (+)
mrpl30 mrpl30,LOC102785580 coding downstream 276699 21468365 ~ 21471668 (+)
G125825 NA non-coding upstream 231070 20958707 ~ 20959962 (+)
G125826 NA non-coding upstream 232993 20953737 ~ 20958039 (+)
LOC120570516 NA non-coding upstream 279674 20903994 ~ 20911358 (+)
G125749 NA non-coding upstream 355278 20832494 ~ 20835754 (+)
G125738 NA non-coding upstream 365487 20795045 ~ 20825545 (+)
G125903 NA non-coding downstream 15588 21207254 ~ 21207454 (+)
G125904 NA non-coding downstream 17293 21208959 ~ 21209742 (+)
G125915 NA non-coding downstream 83777 21275443 ~ 21275840 (+)
G125957 NA non-coding downstream 215847 21407513 ~ 21409113 (+)
G125958 NA non-coding downstream 217526 21409192 ~ 21409965 (+)
G125757 rpl24 other upstream 325590 20860152 ~ 20865442 (+)
mpc2b mpc2 other upstream 332116 20853089 ~ 20858916 (+)
G125627 LOC108259060,LOC105016494,LOC108266561,LOC104955100 other upstream 669758 20492178 ~ 20521274 (+)
myo16 myo16,LOC103372229 other upstream 925442 20153855 ~ 20265590 (+)
LOC120569357 LOC103369896,LOC102289365,LOC102197623,LOC101484406 other upstream 1197708 19968360 ~ 19993324 (+)
sox1a LOC103372296,LOC101481640,LOC100691128 other downstream 427682 21619348 ~ 21634757 (+)
LOC120569986 LOC103372298,LOC100698342,LOC102199663,LOC102299751,LOC101469554,LOC102782232 other downstream 463460 21655126 ~ 21691804 (+)
fbxl3a fbxl3 other downstream 1539257 22730923 ~ 22738653 (+)
G126363 lmo7 other downstream 1615527 22807193 ~ 22815102 (+)
dachd LOC107389725,LOC105927577,LOC103357501,LOC103134744 other downstream 1786936 22978602 ~ 23100083 (+)

Expression


Co-expression Network