G125957


Basic Information

Item Value
gene id G125957
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 21407513 ~ 21409113 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU169405
CATTGACCTCTTGCACTCAAAGAAGGATGTCTGCAGGGCTTTGCAGTGGCCTTCCTTCAAACACTCACTGGGCATCTTCCCCTCCTCACAAATTAAGAaACCTTGACCACGCAGTCGTGCTGAAGGAGACACGCCTTGAAGTCCTCTCTGACACCGGCGCATGCTCGGGTATCTTCCTCTTTATCCTCGTAATATTTCGGCATTGTGCACAATCCAATTTAAAACCAATATTCCCTTACTCATAAATTCACAGGTGCAAAAATGGGCTAGATAACAGACGTGACATCAGACCTCAATGTTATGAAAGCTTTCAGCCACcatgtttctgaaactgcatGATGGGAAAACGGAAGTACATTGGCGCAAAGAAGTGAACGCTGGGAAGATTTGTAGTTTTTCTATGTCGATTTTGTTTAAACGTTTGAAAG

Function

GO:

id name namespace
GO:0009186 deoxyribonucleoside diphosphate metabolic process biological_process
GO:0044430 obsolete cytoskeletal part cellular_component
GO:0005856 cytoskeleton cellular_component
GO:0015630 microtubule cytoskeleton cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU169405 True 428 lncRNA 0.44 2 21407513 21409113

Neighbor

gene id symbol gene type direction distance location
si:dkey-4e7.3 LOC103368133 coding upstream 612 21398530 ~ 21406901 (+)
inpp4aa inpp4a,LOC106581879 coding upstream 20957 21369820 ~ 21386556 (+)
mfsd9 mfsd9 coding upstream 54856 21345532 ~ 21352657 (+)
LOC120570592 fhl2,LOC104956538 coding upstream 132885 21269253 ~ 21274628 (+)
uxs1 uxs1 coding upstream 213369 21152480 ~ 21194144 (+)
mrpl30 mrpl30,LOC102785580 coding downstream 59252 21468365 ~ 21471668 (+)
arhgef7a arhgef7,LOC103372297,LOC102301399,LOC106582025 coding downstream 109389 21518502 ~ 21550035 (+)
mcf2lb LOC100707473,LOC101480000,LOC102199374,LOC103372300 coding downstream 283108 21692221 ~ 21742235 (+)
phf11 NA coding downstream 334635 21743748 ~ 21755526 (+)
trim13 trim13 coding downstream 384161 21793274 ~ 21809912 (+)
G125915 NA non-coding upstream 131673 21275443 ~ 21275840 (+)
G125904 NA non-coding upstream 197771 21208959 ~ 21209742 (+)
G125903 NA non-coding upstream 200059 21207254 ~ 21207454 (+)
G125892 NA non-coding upstream 215847 21191032 ~ 21191666 (+)
G125825 NA non-coding upstream 447551 20958707 ~ 20959962 (+)
G125958 NA non-coding downstream 79 21409192 ~ 21409965 (+)
G125992 mitd1,LOC102785871 non-coding downstream 56797 21465910 ~ 21468132 (+)
G125994 txndc9 non-coding downstream 64050 21473163 ~ 21476750 (+)
G126000 NA non-coding downstream 70816 21479929 ~ 21482025 (+)
G126160 LOC103371890 non-coding downstream 941914 22351027 ~ 22352358 (+)
G125757 rpl24 other upstream 542071 20860152 ~ 20865442 (+)
mpc2b mpc2 other upstream 548597 20853089 ~ 20858916 (+)
G125627 LOC108259060,LOC105016494,LOC108266561,LOC104955100 other upstream 886239 20492178 ~ 20521274 (+)
myo16 myo16,LOC103372229 other upstream 1141923 20153855 ~ 20265590 (+)
LOC120569357 LOC103369896,LOC102289365,LOC102197623,LOC101484406 other upstream 1414189 19968360 ~ 19993324 (+)
sox1a LOC103372296,LOC101481640,LOC100691128 other downstream 210235 21619348 ~ 21634757 (+)
LOC120569986 LOC103372298,LOC100698342,LOC102199663,LOC102299751,LOC101469554,LOC102782232 other downstream 246013 21655126 ~ 21691804 (+)
fbxl3a fbxl3 other downstream 1321810 22730923 ~ 22738653 (+)
G126363 lmo7 other downstream 1398080 22807193 ~ 22815102 (+)
dachd LOC107389725,LOC105927577,LOC103357501,LOC103134744 other downstream 1569489 22978602 ~ 23100083 (+)

Expression


Co-expression Network