G126175


Basic Information

Item Value
gene id G126175
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 22445328 ~ 22446121 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU169701
GTCCGCTCTGTGCAGTTCACTGGACCAGGTGTTGGGTCTTTGGTGGATTCTTCTTGAGGCTTTTctgtctctgtgtccaCGCTGTCACTGTGGTTTAATGTAGGTGGTGTGGATGGTGTCTCTGTGTTATCATTTGGGCTTTTAGATCCTTGAGCCACCTCTTCTTCCTGTAACTCGCCTGTCCCACCATGGCTCTTTCCTGTCTGCGAGTTTGCACCACTCCAGGCCTCAGATTTTGGCTTGTCCAGTCCAGGAAAGCAGATGACAACTAAATACCAATGAGCCtcctgattgacaggCACAAACAGGAAGTCCTTATTGAAGATGTCCACGTGTCGTGTCCAC

Function

GO:

id name namespace
GO:0090304 nucleic acid metabolic process biological_process

KEGG:

id description
ko03030 DNA replication
ko03420 Nucleotide excision repair
ko03430 Mismatch repair
ko03440 Homologous recombination
ko03460 Fanconi anemia pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU169701 True 345 lncRNA 0.50 4 22445328 22446121

Neighbor

gene id symbol gene type direction distance location
tfg tfg coding upstream 95269 22332905 ~ 22350059 (+)
jagn1a LOC104964438,LOC103371888,LOC106923881,LOC103134718 coding upstream 112527 22330500 ~ 22332801 (+)
col8a1a col8a1 coding upstream 115696 22316100 ~ 22329632 (+)
tmem30c LOC104964416 coding upstream 172705 22268840 ~ 22272623 (+)
cmss1 cmss1 coding upstream 176880 22227032 ~ 22268448 (+)
mycbp2 mycbp2,LOC102794783 coding downstream 222185 22668306 ~ 22730423 (+)
zgc:162944 LOC104958623,LOC102208337,LOC101482774 coding downstream 298339 22744460 ~ 22747518 (+)
kctd12.1 kctd12 coding downstream 306984 22753105 ~ 22754604 (+)
commd6 commd6,LOC102792157 coding downstream 404820 22850941 ~ 22855543 (+)
tbc1d4 tbc1d4 coding downstream 410829 22856950 ~ 22887388 (+)
G126169 NA non-coding upstream 59574 22385529 ~ 22385754 (+)
G126162 LOC103371890 non-coding upstream 87659 22356094 ~ 22357669 (+)
G126160 LOC103371890 non-coding upstream 92970 22351027 ~ 22352358 (+)
G126000 NA non-coding upstream 963303 21479929 ~ 21482025 (+)
G125994 txndc9 non-coding upstream 968578 21473163 ~ 21476750 (+)
G126246 NA non-coding downstream 89010 22535131 ~ 22537513 (+)
G126267 NA non-coding downstream 170190 22616311 ~ 22620608 (+)
G126280 LOC104958628,LOC108232414,LOC106098708 non-coding downstream 193349 22639470 ~ 22639762 (+)
G126290 NA non-coding downstream 211396 22657517 ~ 22658892 (+)
G126352 NA non-coding downstream 324589 22770710 ~ 22770920 (+)
LOC120569986 LOC103372298,LOC100698342,LOC102199663,LOC102299751,LOC101469554,LOC102782232 other upstream 753524 21655126 ~ 21691804 (+)
sox1a LOC103372296,LOC101481640,LOC100691128 other upstream 810571 21619348 ~ 21634757 (+)
G125757 rpl24 other upstream 1579886 20860152 ~ 20865442 (+)
mpc2b mpc2 other upstream 1586412 20853089 ~ 20858916 (+)
G125627 LOC108259060,LOC105016494,LOC108266561,LOC104955100 other upstream 1924054 20492178 ~ 20521274 (+)
fbxl3a fbxl3 other downstream 284802 22730923 ~ 22738653 (+)
G126363 lmo7 other downstream 361072 22807193 ~ 22815102 (+)
dachd LOC107389725,LOC105927577,LOC103357501,LOC103134744 other downstream 532481 22978602 ~ 23100083 (+)
cwc22 cwc22 other downstream 1737828 24183949 ~ 24199835 (+)
sestd1 sestd1 other downstream 1831036 24277157 ~ 24298218 (+)

Expression


Co-expression Network