G126363 (lmo7)


Basic Information

Item Value
gene id G126363
gene name lmo7
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 22807193 ~ 22815102 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU169945
TGTAGTGGCTCGGGAAAGTGAGGTGAGGCGGGACGACTGGGTCCCGAAGGGCCTTGGTGCGATAACTGAGGTCAGACGTGCGCTATCGGATCTCTGGTAGCTCCTGGGAAGGGATGCGGAAACCCGAGACACCCCAGGAGGCTTGGGTTCCATTGAGCTgggctgtggttgttgtttgtACAGAGAACCAGAGGAGGGGGCCCCCACCTCAGTCTGTGTGCGCGACAATGAGGGCCTTGGCTCGGGCACCTTTTGTAGGGAGCTAGAAGAGGAGACGGTGGTTGTGGTCTCCTCTGTCTTGACTGTGCCGGTGCGTTCTGAGACTGGACTCCTCTGTaaaggtgctgctgctgctggagactGGGAGCTGTGGAAAAAGCTGCGGCTGGTGGGAGTGATGGTGGAAGTGATGGTGGAAGTGATGGCGGTTGTGGAGTCGCTGCCTGCAGGACTGTCCACAATATCAACTTCAATTGAGGTGGGAGGGGAAGTGGCACTGCCAGTCGCTGGGGAGGCAGCAGGGGGTTCGGCCTCTTTCCGAGAAGGCTCAAGGGGTTCAGAGGAATAGTAAGGAGTGTCAATAGTGTAGCTCCTGGCAGGAAAGGTCCGGGTACGTGGGGCAATGATAGGTGTATCAAATACGTCTTCGTCATCCAGGTAAGACAGAGATGCGAGACGACCGCCAATGCTGttctttcctttattttctCTCTCTTCTTGCATCTCCTTGAAGGTCTTGGACCTTCTGCTGCTGTATGTGATCTCCTCTATCTTCTCCcgttcctctttcttcttcactaTATCAGAGTTGACACTCCTGCGCCGGTTTTTCCATTTGCTCAGGTCATCCTGCCACTTATCCTCAGTTGACTTTATCCGCTCACGATACTTCTGCAGCTCTTCGAAGCGAACCTGCTGGATGACGGTGGGGTCAACCTGGATATCGCTTGTTGATTTACTCCTGGTGAGTGTGCCTTCATCCTCTGTGTAAATGGGGTTGGCCCAGCTGCGCCGGCTGTCCTCATTGCGTTCGGCCCGTTTCTTCCTTAGTGGAGCAGGCATGTAGCCTGAGGCTTTGTCTTTAGTGGGCAGGAACTGGTTAAACTGGGCGCTGGCCTTGGGTGTGATGATTACTGACCGTCGGTAACTCAGACTGTCCTTGTTGTCAGCCATCCTGAAGACAGAGTCTGCCTCAGTGTCA

Function

symbol description
lmo7 Predicted to enable actinin binding activity; metal ion binding activity; and protein C-terminus binding activity. Involved in positive regulation of transcription by RNA polymerase II. Located in cell surface; cytoplasm; and nuclear envelope.

NR:

description
PREDICTED: LIM domain only protein 7 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU169945 True 1201 TUCP 0.55 4 22807193 22815102

Neighbor

gene id symbol gene type direction distance location
kctd12.1 kctd12 coding upstream 52589 22753105 ~ 22754604 (+)
zgc:162944 LOC104958623,LOC102208337,LOC101482774 coding upstream 59675 22744460 ~ 22747518 (+)
mycbp2 mycbp2,LOC102794783 coding upstream 76770 22668306 ~ 22730423 (+)
tfg tfg coding upstream 457134 22332905 ~ 22350059 (+)
jagn1a LOC104964438,LOC103371888,LOC106923881,LOC103134718 coding upstream 474392 22330500 ~ 22332801 (+)
commd6 commd6,LOC102792157 coding downstream 35839 22850941 ~ 22855543 (+)
tbc1d4 tbc1d4 coding downstream 41848 22856950 ~ 22887388 (+)
klf12b klf12 coding downstream 99099 22914201 ~ 22960754 (+)
clybl clybl coding downstream 344863 23159965 ~ 23222241 (+)
zic2a zic2 coding downstream 428530 23243632 ~ 23247660 (+)
G126358 NA non-coding upstream 8881 22797901 ~ 22798312 (+)
G126352 NA non-coding upstream 36273 22770710 ~ 22770920 (+)
G126290 NA non-coding upstream 148301 22657517 ~ 22658892 (+)
G126280 LOC104958628,LOC108232414,LOC106098708 non-coding upstream 167431 22639470 ~ 22639762 (+)
G126267 NA non-coding upstream 186585 22616311 ~ 22620608 (+)
LOC120569671 NA non-coding downstream 151524 22966626 ~ 22969170 (+)
G126439 zic5,LOC102789084 non-coding downstream 417765 23232867 ~ 23236823 (+)
G126447 NA non-coding downstream 537475 23352577 ~ 23352820 (+)
G126463 nalcn non-coding downstream 584789 23399891 ~ 23400386 (+)
G126515 NA non-coding downstream 889283 23704385 ~ 23704642 (+)
fbxl3a fbxl3 other upstream 68540 22730923 ~ 22738653 (+)
LOC120569986 LOC103372298,LOC100698342,LOC102199663,LOC102299751,LOC101469554,LOC102782232 other upstream 1115389 21655126 ~ 21691804 (+)
sox1a LOC103372296,LOC101481640,LOC100691128 other upstream 1172436 21619348 ~ 21634757 (+)
G125757 rpl24 other upstream 1941751 20860152 ~ 20865442 (+)
mpc2b mpc2 other upstream 1948277 20853089 ~ 20858916 (+)
dachd LOC107389725,LOC105927577,LOC103357501,LOC103134744 other downstream 163500 22978602 ~ 23100083 (+)
cwc22 cwc22 other downstream 1368847 24183949 ~ 24199835 (+)
sestd1 sestd1 other downstream 1462055 24277157 ~ 24298218 (+)
fzd5 LOC104950716,LOC108238837 other downstream 1557369 24372471 ~ 24394985 (+)
cacnb4a cacnb4 other downstream 2815005 25630107 ~ 25664427 (+)

Expression


Co-expression Network