G126520


Basic Information

Item Value
gene id G126520
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 23713488 ~ 23713977 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU170218
atttctctttggactttcaatttgaattatgaataaatatttcctccatagtgccctgccacacaggtgtatttgtgttatgtggtgaatgtgaaaatgaactgctacctcctctgtcagctctagctactgaaaagaaataagcagagaaattagaccaatcacaaaagctggtcagtctgacatcatattgcctgagctcattactattcattacctcgcccagttgggctgggtaaaggattctgacagccaggctctcagtggctagctgttagccaatcagattcaaacagcttagcttgttgaatattaatgagaactggcagaaatcatCTGAGTCTTCTGTAGTTTTTCTATAACacgcttgaaacaaggtaaccaaggcatttttttttcacaaaaaatgttacagagtccatggtagaacttctggcattaccacaaagtaatgaaatacgtgtggtagggcacctttaagtataACTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU170218 True 490 lncRNA 0.39 1 23713488 23713977

Neighbor

gene id symbol gene type direction distance location
asmtl NA coding upstream 9561 23695387 ~ 23703927 (+)
p2ry8 p2ry8,gpr82,LOC103134757 coding upstream 18294 23690836 ~ 23695194 (+)
upf3a upf3a,LOC104960519 coding upstream 23611 23679658 ~ 23689877 (+)
cdc16 cdc16,LOC102786741 coding upstream 36213 23663340 ~ 23677275 (+)
cfap97d2 NA coding upstream 50297 23657254 ~ 23663191 (+)
ppp2r3b ppp2r3b,LOC100705877,LOC102783484,LOC107099188,LOC102198241 coding downstream 191159 23905136 ~ 23929409 (+)
usp9 usp9x,LOC104960511,LOC100693451 coding downstream 265760 23979737 ~ 24028770 (+)
itga4 itga4 coding downstream 353293 24067270 ~ 24089428 (+)
LOC120569576 NA coding downstream 424150 24138127 ~ 24152773 (+)
LOC120569575 ssfa2 coding downstream 439099 24153076 ~ 24179221 (+)
G126519 NA non-coding upstream 2370 23710403 ~ 23711118 (+)
G126516 NA non-coding upstream 7786 23704943 ~ 23705702 (+)
G126515 NA non-coding upstream 8846 23704385 ~ 23704642 (+)
G126463 nalcn non-coding upstream 313102 23399891 ~ 23400386 (+)
G126447 NA non-coding upstream 360668 23352577 ~ 23352820 (+)
G126563 NA non-coding downstream 232167 23946144 ~ 23947968 (+)
G126581 NA non-coding downstream 291096 24005073 ~ 24005642 (+)
G126582 rpl8,LOC106586796,LOC107673716,LOC106581950 non-coding downstream 316068 24030045 ~ 24034174 (+)
LOC120570646 NA non-coding downstream 320899 24034876 ~ 24039495 (+)
G126628 NA non-coding downstream 378093 24092070 ~ 24098838 (+)
dachd LOC107389725,LOC105927577,LOC103357501,LOC103134744 other upstream 613405 22978602 ~ 23100083 (+)
G126363 lmo7 other upstream 898386 22807193 ~ 22815102 (+)
fbxl3a fbxl3 other upstream 974835 22730923 ~ 22738653 (+)
LOC120569986 LOC103372298,LOC100698342,LOC102199663,LOC102299751,LOC101469554,LOC102782232 other upstream 2021684 21655126 ~ 21691804 (+)
sox1a LOC103372296,LOC101481640,LOC100691128 other upstream 2078731 21619348 ~ 21634757 (+)
cwc22 cwc22 other downstream 469972 24183949 ~ 24199835 (+)
sestd1 sestd1 other downstream 563180 24277157 ~ 24298218 (+)
fzd5 LOC104950716,LOC108238837 other downstream 658494 24372471 ~ 24394985 (+)
cacnb4a cacnb4 other downstream 1916130 25630107 ~ 25664427 (+)
G127165 LOC100691947,LOC102776592,LOC101469272,LOC102213137 other downstream 2403011 26116988 ~ 26129879 (+)

Expression


Co-expression Network