kctd12.1 (kctd12)


Basic Information

Item Value
gene id kctd12.1
gene name kctd12
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 22753105 ~ 22754604 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039817088.1
ACAAGTCGCTGCCACTTAGTTGGTCAGTGTTTCCACTGATCCCACATCAGTGCAGAGGCTCAGAGAAGATGGCACTGGCCGACACAGAGCGCGGAGTGTCCAACTGCGGCGACTCGGGTTCCCCGTTTTCAGAGATTATTGAGCTGAATGTCGGCGGACAGGTTTATGTTACCAGACATACAACTCTCATCGCCGTCCCAGACTCGCTGCTGTGGAACATGTTCAGCAAGAAGTCACCCAAGGAGTTGGCGAGAGACAGCAAAGGGCGCTTCTTCTTGGACAGGGACGGGTTCTTGTTCCGCTACATCCTAGATTATCTCCGAGACCTGAACTTGGTCCTACCGGACTACTTCCCCGAGAAAAGTCGCCTGCAGAGGGAGGCTGACTTTTTCCAGCTGCGGGACCTTGCCAAACGCCTCAGCCCCCGGGTGAGTAAGGACAATTCAATCAGCGAGGAGATCAGCCAGAGTGACACGGAGGAAGGTGCGCAGCAGTGCGGCTCCTCCGGCGGTATAGAGACTTTACGCGCCATGTCGGTCAGCGGGGCCATGCGCTCCCCATCCCTGGACTCCAGAAAGTCGGGCTATATCACAGTAGGATACCGCGGATCGTACACCATTGGCAGAGACATCCAAACCGATGCCAAATTCAGGAGAGTGGCGCGCATCACGGTTTGCGGGAAGACTGCCCTGGCCAAAGAAGTGTTTGGGGACACACTGAATGAGAGCAGAGACCCGGACAGGCCCCCGGAGAGATACACATCCCGGTACTATCTCAAGTATAATTTTCTAGAGCAGGCATTTGACAAGCTGACAGAGGTGGGCTTCCACATGGTGGCCTGCAGCTCCACAGGCACCTGCGCATACACCAGTAATGATCCAAACGAGGACAAAATCTGGACAAGCTACACTGAATATGTCTTCTGTCGGGATTAACTAACAGTAAACATGTCGAGTTGATGTAAATAGACATGTCATAATCTAGAGGGGAATGTCTTTAAATATAATTGCATTTGCTGTGTTGAATGGTAACTTTGGTCAAGAGCCAGTGACTGCAAAATACTGCTCCATTATTCTAATTAACCAGAGACACCAAATGCCTCTAGATAGATTCTACACAAATTAGTGGAAATGGAATTTAGATGTTTAAAGTGAGCAGAGCATCGTTTGAGTTGGCGCACCCATCAAAAGCCCCATTTTGTGGAAAACACCAACAAAATGCCATCATCTCCACCTCATAGAACTGCATATCAATGTTTCAGTCATATCTGACTCAGTGCTGCGTGAATTGAGCGGCATCCAAGAACAGACAAGCAGCAATTAGAATTCAGTGTCATTGTAACTTGATCGTATGTTTggccaattttttttattatctaagAGGCTCTTATACATAGCAGTTATATCACTGACATGATTGTAAGTGTATGTGCTTGCTTGGTATAGCTGTATTTGTTAAACCTGTTCAGATGAAATAAAATCTTATACTCAGCTATTCTCA

Function

symbol description
kctd12 Enables identical protein binding activity. Predicted to be involved in protein homooligomerization. Predicted to act upstream of or within regulation of G protein-coupled receptor signaling pathway. Predicted to be located in cell projection. Predicted to be part of receptor complex. Predicted to be active in postsynaptic membrane and presynaptic membrane.

NR:

description
BTB/POZ domain-containing protein KCTD12

GO:

id name namespace
GO:0051260 protein homooligomerization biological_process

KEGG:

id description
K21918 KCTD8_12_16; BTB/POZ domain-containing protein KCTD8/12/16

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039817088.1 True 1500 mRNA 0.48 1 22753105 22754604

Neighbor

gene id symbol gene type direction distance location
zgc:162944 LOC104958623,LOC102208337,LOC101482774 coding upstream 5587 22744460 ~ 22747518 (+)
mycbp2 mycbp2,LOC102794783 coding upstream 22682 22668306 ~ 22730423 (+)
tfg tfg coding upstream 403046 22332905 ~ 22350059 (+)
jagn1a LOC104964438,LOC103371888,LOC106923881,LOC103134718 coding upstream 420304 22330500 ~ 22332801 (+)
col8a1a col8a1 coding upstream 423473 22316100 ~ 22329632 (+)
commd6 commd6,LOC102792157 coding downstream 96337 22850941 ~ 22855543 (+)
tbc1d4 tbc1d4 coding downstream 102346 22856950 ~ 22887388 (+)
klf12b klf12 coding downstream 159597 22914201 ~ 22960754 (+)
clybl clybl coding downstream 405361 23159965 ~ 23222241 (+)
zic2a zic2 coding downstream 489028 23243632 ~ 23247660 (+)
G126290 NA non-coding upstream 94213 22657517 ~ 22658892 (+)
G126280 LOC104958628,LOC108232414,LOC106098708 non-coding upstream 113343 22639470 ~ 22639762 (+)
G126267 NA non-coding upstream 132497 22616311 ~ 22620608 (+)
G126246 NA non-coding upstream 215592 22535131 ~ 22537513 (+)
G126175 NA non-coding upstream 306984 22445328 ~ 22446121 (+)
G126352 NA non-coding downstream 16106 22770710 ~ 22770920 (+)
G126358 NA non-coding downstream 43297 22797901 ~ 22798312 (+)
LOC120569671 NA non-coding downstream 212022 22966626 ~ 22969170 (+)
G126439 zic5,LOC102789084 non-coding downstream 478263 23232867 ~ 23236823 (+)
G126447 NA non-coding downstream 597973 23352577 ~ 23352820 (+)
fbxl3a fbxl3 other upstream 14452 22730923 ~ 22738653 (+)
LOC120569986 LOC103372298,LOC100698342,LOC102199663,LOC102299751,LOC101469554,LOC102782232 other upstream 1061301 21655126 ~ 21691804 (+)
sox1a LOC103372296,LOC101481640,LOC100691128 other upstream 1118348 21619348 ~ 21634757 (+)
G125757 rpl24 other upstream 1887663 20860152 ~ 20865442 (+)
mpc2b mpc2 other upstream 1894189 20853089 ~ 20858916 (+)
G126363 lmo7 other downstream 52589 22807193 ~ 22815102 (+)
dachd LOC107389725,LOC105927577,LOC103357501,LOC103134744 other downstream 223998 22978602 ~ 23100083 (+)
cwc22 cwc22 other downstream 1429345 24183949 ~ 24199835 (+)
sestd1 sestd1 other downstream 1522553 24277157 ~ 24298218 (+)
fzd5 LOC104950716,LOC108238837 other downstream 1617867 24372471 ~ 24394985 (+)

Expression


Co-expression Network