LOC120569576


Basic Information

Item Value
gene id LOC120569576
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 24138127 ~ 24152773 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039817456.1
GTCCGCTGCGGACACGCCCCCTCTGGTTTCAGGAAGCGGAAGCAGGAATGTTGCagtgttttcagaaaagttTGGAGAAGTTTGACAGTTTGGAAGCAGAGACACAAACTGCGGAGAAACATGACGgtGTGTTACCTGCTGCTGATGTTGCTGTAGAGTCGTCAGTCTcctctgactgactgactgactgactggccTCAACCAGACACACAGAAAGGCAGATATGGAGAGTGGATCTCTGGAAATGGACACCAGCACTGCTCCAGATCCAAGTGTGCAGTCAGACCACCGCTTAGCCGGCCTGCGGCGTCGGGCCTGGGCCCAGAGTAGGGACTCCATCTGGCAAGAATCAGAAGCAGAGAGCTGTGACCCCCAGGGGTCCCAACAGAACGTAATGGATGGGGAAGAACAAAGACCCTCAGAAGAACCAGggcGGGTTCCTAACAAGATCACAAGCTGGCTGATTGAATGCAGGACTCCCCTCGGAGCCTCTTTAGATGATCAGAGTGCTTCTCCAAGCAGAGGTAATccacattttctgtgtgtgttgtttgtataccGTACATTACATTGTGAGGACCCCAACCTGATAGGACATGTTCTGGGGATGTTGGTTCATGACTAAATATTTGCAACTAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039817456.1 True 640 mRNA 0.51 5 24138127 24152773

Neighbor

gene id symbol gene type direction distance location
itga4 itga4 coding upstream 48699 24067270 ~ 24089428 (+)
usp9 usp9x,LOC104960511,LOC100693451 coding upstream 109357 23979737 ~ 24028770 (+)
ppp2r3b ppp2r3b,LOC100705877,LOC102783484,LOC107099188,LOC102198241 coding upstream 208718 23905136 ~ 23929409 (+)
asmtl NA coding upstream 434200 23695387 ~ 23703927 (+)
p2ry8 p2ry8,gpr82,LOC103134757 coding upstream 442933 23690836 ~ 23695194 (+)
LOC120569575 ssfa2 coding downstream 303 24153076 ~ 24179221 (+)
znf385b znf385b,LOC102780200 coding downstream 53886 24206659 ~ 24255994 (+)
LOC120569821 NA coding downstream 109414 24262187 ~ 24274142 (+)
plekhm3 plekhm3 coding downstream 158134 24310907 ~ 24345969 (+)
fhip1b fam160a2 coding downstream 525724 24678497 ~ 24706412 (+)
G126628 NA non-coding upstream 39289 24092070 ~ 24098838 (+)
LOC120570646 NA non-coding upstream 98632 24034876 ~ 24039495 (+)
G126582 rpl8,LOC106586796,LOC107673716,LOC106581950 non-coding upstream 103953 24030045 ~ 24034174 (+)
G126581 NA non-coding upstream 132485 24005073 ~ 24005642 (+)
G126563 NA non-coding upstream 190159 23946144 ~ 23947968 (+)
G126675 NA non-coding downstream 27677 24180450 ~ 24182202 (+)
G126712 NA non-coding downstream 227586 24380359 ~ 24383546 (+)
G126744 NA non-coding downstream 302964 24455737 ~ 24456127 (+)
G126802 NA non-coding downstream 692203 24844976 ~ 24859362 (+)
LOC120570481 LOC106579430,LOC106609078,LOC107088658 non-coding downstream 696625 24849398 ~ 24852960 (+)
dachd LOC107389725,LOC105927577,LOC103357501,LOC103134744 other upstream 1038044 22978602 ~ 23100083 (+)
G126363 lmo7 other upstream 1323025 22807193 ~ 22815102 (+)
fbxl3a fbxl3 other upstream 1399474 22730923 ~ 22738653 (+)
LOC120569986 LOC103372298,LOC100698342,LOC102199663,LOC102299751,LOC101469554,LOC102782232 other upstream 2446323 21655126 ~ 21691804 (+)
sox1a LOC103372296,LOC101481640,LOC100691128 other upstream 2503370 21619348 ~ 21634757 (+)
cwc22 cwc22 other downstream 31176 24183949 ~ 24199835 (+)
sestd1 sestd1 other downstream 124384 24277157 ~ 24298218 (+)
fzd5 LOC104950716,LOC108238837 other downstream 219698 24372471 ~ 24394985 (+)
cacnb4a cacnb4 other downstream 1477334 25630107 ~ 25664427 (+)
G127165 LOC100691947,LOC102776592,LOC101469272,LOC102213137 other downstream 1964215 26116988 ~ 26129879 (+)

Expression


Co-expression Network