LOC120569739 (LOC103352901,LOC102791869,LOC102207044,LOC101487838,LOC100703644)


Basic Information

Item Value
gene id LOC120569739
gene name LOC103352901,LOC102791869,LOC102207044,LOC101487838,LOC100703644
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 21008677 ~ 21013333 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039817773.1
tatgAAGGTGCTCAAAGTGTGCTGAGATTTAGTTGAGACACCAGTCTCCGGTTCCCGTTTCTCTCTTATGCTGCCTCTCCCACGACTCTGTCCTGTTTTCTCATCTTTGCTTCATCCTTTTACCTTCACACCCCTGCACATTAGTAAGcagcatttttttctctctctttgcaaTGTCTCATCTTTGCGTCACCTAACAGTCACCTGCCCTCAACATGGATATCGGAGGACTGACCACAGTGGTAGCAAATTCTGCTTACATCAATGCTCGTGGAAGCATTGATGGCTCCAGTGCAGCAGCAACACGGGATAAGAAGTACCATTCTCGCCTCAAACTGCCCCACATCACTGTGTGTGAGGGCCTGATGGACACCCTTGATTTGTCCTTTTGCACGGTCTGCATGGAACAGCCTATCGGCAAGCGCCTCTTTAGAGAATTCTTGGACTCAAAAACAGAGTATCACGGGGCTTGCCGTTTATGGAAAGACATCGAGGAATATGACCTGGTGGAGGATTCTGACCGGGTAAAGAAGGCCTCAAAGATTGTCCAGCGTTACATGGACCCATCTGCCAAGCACTACTGCCCGTTCCTGTCTGAGGACATCATGGCTAAGGTGAAGGAAAGCCAGGAGGCTGCAGGCGATGATTTGTTTGCTGCAGCATTGGCCACAATGTTGGACTTTCTGCGTGAGGCCCCCTACTCTTTCTTCCTGGAGAGCTTGTATCTGAAACGGTACGTGCAGTGGAAGTGGCTTGAGATGCAGCCCATGGATGCCGACTGGTTCCTAGACTTCCGTGTGCTGGGGAAAGGTGGGTTTGGGGAGGTGTCTGCCTGTCAGATGAAAGCCACAGGACAACTGTATGCCTGTAAGAAACTCAACAAGAAAAGGCTGAAAAAGAGGAAAGGCTTTGAGGGTGCGATGGTGGAGAAGAGGATTCTTGAGAAGGTTCACAGTCGTTTTATTGTGTCATTGGCGTACGCCTTCCAGACAAAGGACGAACTTTGTCTGGTCATGACCATCATGAATGGAGGAGACCTCAAGTACCATATCTACCTGGTGGATGAGAACAACCCGGGCTTTGATGAGCCCAGAGCCTGTTTTTACATCGCTCAGATCATCCAAGGCTTGGAGCACCTCCACCAGAAACGAATCATCTACAGAGATCTCAAACCCGAAAATGTGCTGCTAGATAACGATGGGAATGTGCGTATATCTGATCTGGGTCTCGCTGTTGAGCTAAAAGAAGGCAAAACACTGACCAAAGGATATGCTGGGACACCAGGGTACATGGCTCCAGAGATGCTGAAAGGGGAGAAGTATGACACTTCTGTCGATTACTTCACTCTGGGAGTGACACTGTTTGAGTTCATGGCGGCTAAGAATCCATTCAGAAACAGGGGGGAGAAGGTTGAACGTGAGGAGATGAAAGAGCGTATGCTGACACGGGCGGTGACCTATCCGGACAATTTCAGTGAGCATGCAAAGTCGCTCTGTGATGGTCTGCTGGCTAAAGAGGTCGATCAGAGGATGGGTTTTAAGAATGGATGCTGTGATGAGATCAGAGGGCACTCATTTTTCAGTGACATCAACTGGAGGAAACTGAATGCAGGTATTCTACCTCCTCCTTTCGTCCCGGACCCGAAAGTGGTGTACGCTAAAAGTCTGGATGACGTTGGGGCTTTCTCCTCTGTGAAGGGAGTGACATTGGAGGACCCTGACAAGACCTTTTTTGATGAGTTTTCCTCAGGGAACATCCCCATACCCTGGCAAGAGGAGATGATCGATACAGGCATTTATGGAGAGCTCAACGTTTGGGGTCCTCATGGCAGCGTCCCCAACGACCTCCGCAGGGAGTCCATACTAGAGCAGCCAAAGTCATCAACCTGCTGCATATCCTAGAGGCACTGAAAAGCCTTCAACCATACAGTGTGCAGACTTGTGTGGCATAAAGACTCTAGTACTCAGGACAAAAACAAGTCTGAACCATGTAATCACAGTTTTAAAACCGCTTGAGACTCTAAAGTTTTATTGGTGAGTGCAGAAAACAACAAGAACAGAATTAAGGTGGATTTCTAACCTGAAATGGACATATTGTAGATTTaggagttaaaaaagaaaagaaatatattGACATTATATCCTTTCTCCCCCCTCTCCAAttctttcttcatcttctttctttgtccctctctctctgttcactctcttctctttgtgtgtgcatttgttaaGTTATTGTAATGCTTTGAGATTTAAAGTggattttaaaaattaaaatgtttaggAGGGGCTTATGTGATATATTTGGTGCTGACTGAAAGTCGCATGTtgaacatgtaaacatgttgatTTCCCTCTCTTGCATATTTGCatttaatggaaaaaaaaagttctttatGAGGGACATGTATGACTTAGTCTTTACTATAAACGGCTAAATTAACTGCTGCTGTTGCAATACCAAAAGATAAGACACCAAAGTGTCATGCTTTTGATAAACATTTTCTCGTGTTTATTTCATGGTTTATAATTGACTCAAAGTTCATGTAGTCTTGTTGTTATGAGACAAATCAAAATATACATaattctttattatttttttctacaaCAAATCAATTTAGTTGTAAAAGCAAATTGTTGAGCAAAAGTTAATAAACTCAGGAATAGCAACTGTATGAAAAAGTGCTGGTAAATAAAAGTATTGCTTATTGAAA

Function

NR:

description
PREDICTED: rhodopsin kinase-like

GO:

id name namespace
GO:0038032 termination of G protein-coupled receptor signaling pathway biological_process
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004703 G protein-coupled receptor kinase activity molecular_function

KEGG:

id description
K00909 GRK1_7; rhodopsin kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039817773.1 True 2716 mRNA 0.44 7 21008677 21013333

Neighbor

gene id symbol gene type direction distance location
tfdp1a tfdp1 coding upstream 1643 20996513 ~ 21007034 (+)
lamp1b LOC104951941 coding upstream 31801 20971296 ~ 20976876 (+)
pou2f1b pou2f1 coding upstream 55107 20937568 ~ 20953570 (+)
nxpe3 nxpe3 coding upstream 123415 20875392 ~ 20885262 (+)
cep97 cep97 coding upstream 137343 20865935 ~ 20871334 (+)
jam2b LOC108232408 coding downstream 11909 21025242 ~ 21034814 (+)
LOC120569870 st6gal2 coding downstream 58845 21072178 ~ 21124442 (+)
uxs1 uxs1 coding downstream 139147 21152480 ~ 21194144 (+)
LOC120570592 fhl2,LOC104956538 coding downstream 255920 21269253 ~ 21274628 (+)
mfsd9 mfsd9 coding downstream 332199 21345532 ~ 21352657 (+)
G125825 NA non-coding upstream 48715 20958707 ~ 20959962 (+)
G125826 NA non-coding upstream 50638 20953737 ~ 20958039 (+)
LOC120570516 NA non-coding upstream 97319 20903994 ~ 20911358 (+)
G125749 NA non-coding upstream 172923 20832494 ~ 20835754 (+)
G125738 NA non-coding upstream 183132 20795045 ~ 20825545 (+)
G125892 NA non-coding downstream 177699 21191032 ~ 21191666 (+)
G125903 NA non-coding downstream 193921 21207254 ~ 21207454 (+)
G125904 NA non-coding downstream 195626 21208959 ~ 21209742 (+)
G125915 NA non-coding downstream 262110 21275443 ~ 21275840 (+)
G125957 NA non-coding downstream 394180 21407513 ~ 21409113 (+)
G125757 rpl24 other upstream 143235 20860152 ~ 20865442 (+)
mpc2b mpc2 other upstream 149761 20853089 ~ 20858916 (+)
G125627 LOC108259060,LOC105016494,LOC108266561,LOC104955100 other upstream 487403 20492178 ~ 20521274 (+)
myo16 myo16,LOC103372229 other upstream 743087 20153855 ~ 20265590 (+)
LOC120569357 LOC103369896,LOC102289365,LOC102197623,LOC101484406 other upstream 1015353 19968360 ~ 19993324 (+)
sox1a LOC103372296,LOC101481640,LOC100691128 other downstream 606015 21619348 ~ 21634757 (+)
LOC120569986 LOC103372298,LOC100698342,LOC102199663,LOC102299751,LOC101469554,LOC102782232 other downstream 641793 21655126 ~ 21691804 (+)
fbxl3a fbxl3 other downstream 1717590 22730923 ~ 22738653 (+)
G126363 lmo7 other downstream 1793860 22807193 ~ 22815102 (+)
dachd LOC107389725,LOC105927577,LOC103357501,LOC103134744 other downstream 1965269 22978602 ~ 23100083 (+)

Expression


Co-expression Network