Item | Value |
---|---|
gene id | mycbp2 |
gene name | mycbp2,LOC102794783 |
gene type | coding |
species | eurasian perch (Perca fluviatilis) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_053123.1 |
NCBI id | CM020920.1 |
chromosome length | 39440604 |
location | 22668306 ~ 22730423 (+) |
genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
symbol | description |
---|---|
mycbp2 | Enables ubiquitin-protein transferase activity. Acts upstream of or within several processes, including axonogenesis; habenula development; and regulation of pteridine metabolic process. Located in cytoplasm. Is expressed in several structures, including eye; heart; integument; liver; and testis. Orthologous to human MYCBP2 (MYC binding protein 2). |
description |
---|
E3 ubiquitin-protein ligase MYCBP2 isoform X8 |
id | description |
---|---|
K10693 | MYCBP2, PAM; RCR-type E3 ubiquitin transferase |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_039817880.1 | True | 16060 | mRNA | 0.52 | 85 | 22668306 | 22730423 |
XM_039817881.1 | False | 16051 | mRNA | 0.52 | 85 | 22668306 | 22730423 |
XM_039817882.1 | False | 16036 | mRNA | 0.52 | 85 | 22668306 | 22730423 |
XM_039817883.1 | False | 15982 | mRNA | 0.52 | 84 | 22668306 | 22730423 |
XM_039817884.1 | False | 15955 | mRNA | 0.52 | 84 | 22668306 | 22730423 |
XM_039817885.1 | False | 15955 | mRNA | 0.52 | 84 | 22668306 | 22730423 |
XM_039817886.1 | False | 15952 | mRNA | 0.52 | 85 | 22668306 | 22730423 |
XM_039817887.1 | False | 15931 | mRNA | 0.52 | 84 | 22668306 | 22730423 |
XM_039817888.1 | False | 15877 | mRNA | 0.52 | 83 | 22668306 | 22730423 |
XM_039817889.1 | False | 15871 | mRNA | 0.52 | 85 | 22668306 | 22730423 |
XM_039817890.1 | False | 15862 | mRNA | 0.52 | 84 | 22668306 | 22730423 |
XM_039817891.1 | False | 15793 | mRNA | 0.52 | 84 | 22668306 | 22730423 |
XM_039817892.1 | False | 15757 | mRNA | 0.52 | 83 | 22668306 | 22730423 |
XM_039817893.1 | False | 15757 | mRNA | 0.52 | 83 | 22668306 | 22730423 |
XM_039817894.1 | False | 15724 | mRNA | 0.52 | 82 | 22668306 | 22730423 |
XM_039817895.1 | False | 15679 | mRNA | 0.52 | 82 | 22668306 | 22730423 |
XM_039817896.1 | False | 15535 | mRNA | 0.52 | 82 | 22668306 | 22730423 |
XM_039817897.1 | False | 15420 | mRNA | 0.52 | 81 | 22668307 | 22730423 |
XM_039817898.1 | False | 15946 | mRNA | 0.52 | 84 | 22668306 | 22730423 |
XM_039817899.1 | False | 15670 | mRNA | 0.52 | 82 | 22668306 | 22730423 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
tfg | tfg | coding | upstream | 318247 | 22332905 ~ 22350059 (+) |
jagn1a | LOC104964438,LOC103371888,LOC106923881,LOC103134718 | coding | upstream | 335505 | 22330500 ~ 22332801 (+) |
col8a1a | col8a1 | coding | upstream | 338674 | 22316100 ~ 22329632 (+) |
tmem30c | LOC104964416 | coding | upstream | 395683 | 22268840 ~ 22272623 (+) |
cmss1 | cmss1 | coding | upstream | 399858 | 22227032 ~ 22268448 (+) |
zgc:162944 | LOC104958623,LOC102208337,LOC101482774 | coding | downstream | 14037 | 22744460 ~ 22747518 (+) |
kctd12.1 | kctd12 | coding | downstream | 22682 | 22753105 ~ 22754604 (+) |
commd6 | commd6,LOC102792157 | coding | downstream | 120518 | 22850941 ~ 22855543 (+) |
tbc1d4 | tbc1d4 | coding | downstream | 126527 | 22856950 ~ 22887388 (+) |
klf12b | klf12 | coding | downstream | 183778 | 22914201 ~ 22960754 (+) |
G126290 | NA | non-coding | upstream | 9414 | 22657517 ~ 22658892 (+) |
G126280 | LOC104958628,LOC108232414,LOC106098708 | non-coding | upstream | 28544 | 22639470 ~ 22639762 (+) |
G126267 | NA | non-coding | upstream | 47698 | 22616311 ~ 22620608 (+) |
G126246 | NA | non-coding | upstream | 130793 | 22535131 ~ 22537513 (+) |
G126175 | NA | non-coding | upstream | 222185 | 22445328 ~ 22446121 (+) |
G126352 | NA | non-coding | downstream | 40287 | 22770710 ~ 22770920 (+) |
G126358 | NA | non-coding | downstream | 67478 | 22797901 ~ 22798312 (+) |
LOC120569671 | NA | non-coding | downstream | 236203 | 22966626 ~ 22969170 (+) |
G126439 | zic5,LOC102789084 | non-coding | downstream | 502444 | 23232867 ~ 23236823 (+) |
G126447 | NA | non-coding | downstream | 622154 | 23352577 ~ 23352820 (+) |
LOC120569986 | LOC103372298,LOC100698342,LOC102199663,LOC102299751,LOC101469554,LOC102782232 | other | upstream | 976502 | 21655126 ~ 21691804 (+) |
sox1a | LOC103372296,LOC101481640,LOC100691128 | other | upstream | 1033549 | 21619348 ~ 21634757 (+) |
G125757 | rpl24 | other | upstream | 1802864 | 20860152 ~ 20865442 (+) |
mpc2b | mpc2 | other | upstream | 1809390 | 20853089 ~ 20858916 (+) |
G125627 | LOC108259060,LOC105016494,LOC108266561,LOC104955100 | other | upstream | 2147032 | 20492178 ~ 20521274 (+) |
fbxl3a | fbxl3 | other | downstream | 500 | 22730923 ~ 22738653 (+) |
G126363 | lmo7 | other | downstream | 76770 | 22807193 ~ 22815102 (+) |
dachd | LOC107389725,LOC105927577,LOC103357501,LOC103134744 | other | downstream | 248179 | 22978602 ~ 23100083 (+) |
cwc22 | cwc22 | other | downstream | 1453526 | 24183949 ~ 24199835 (+) |
sestd1 | sestd1 | other | downstream | 1546734 | 24277157 ~ 24298218 (+) |