LOC120569870 (st6gal2)


Basic Information

Item Value
gene id LOC120569870
gene name st6gal2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 21072178 ~ 21124442 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039818013.1
CCGCCCCTCAAACTCAGTGGATGTGGATGCGAGAAAAAGGCCAGCAACAGAGTGACAGACATCGCAGCCCCGCCGCTCCGCTCCGCTCCGCTCAGCGTAGTAGTGGATATCTTCTCTGTATACGGCGAGCAGAGGCGAGCCAAAACGAGCCGCATGCTTGCTGTGCAACAAGGCGAACAGGAGCAAAATGGACCGCCGGACAGTAGCACCAGTACCAGCATCCCGCGAGGACCGATACAGTTTCTAGGGTCCTGTTATATCCTGGAAGACACATGGTCATGAAGAAATAGAAGTATCAGTTGAGGCCCTCCAGCTGACCTCTGGGCTAAGTCCTGGCCGTGGGGCTTTGTTGTTGATGGGCCAGCTGAACAGgcgtgtatgtgagtgagaggtAATGAAGTCCAGGATGAGGCAGTGGCGGAGGATAGTGCTGGTGGGAATGCTGGCTTGGGTTCTCCTCTTCCTAGCCCTCCTCTCTTACTTTCTGGATGCTCGTGTGAATGAACCCCTGACCTCTGTTGGCTCTTTACTCTCCCAGCACCCGGACACCCGTCGCCTAGCTTCTATACAGGCCTCCCATCAACAAAATGCCAACCTGGGCTCACGACTTGAGCTGGTTTCCACCTTAACGACAGCCTACCCTGGAGATAAgccagagccagagccttcTGCCCGCTCCACGACCCAGGAGTTCAGCCTGGAGGTGAGCCACAGCCCCAACACTGCTCCCTATGCCATTTATGGTAGCCAGGAGACCAGCCACCAGGACTACCTGGACCCACAGAGCCTGGCTGCCTGGTCCTCCTTTGGTACAGAAAATGTGGGTTCTCACTCGGACCCTTCAGTCCAGAGTCGTGAGAGAACTTCCCAGACAGAGTACCAGAACCACGTCAGCACCACACACTATCACGGTGggggggaagaagaagaagaagaagaagatgacagggacaacgaagaagaagaacaactaGAAAACAGAATAAGGGTTACAGGAGGCAGGAGGCTCGGTGGCGACTCCTCTGATCTGGATGAATATTACTTCTCCAAGTCTGCCTCTGTGGTGCAGAGGTTGTGGCGGGGTCGTGTGTCTGCCGGCATGCTGAGTCCTCGGCTGCAGCGCGCCATGAAGGACTACGTTAGTGCCAACAAACACCATGTTTCCTACGAGGGGCATCGCAGTGCCGCCCAGAGTGCTAAGGAGCTACTGTGTCAAATGAAAGCCCAGGCCCAGCTCAGGACAGTGGACGGGTCGGAGCAGCCCTTCTCTTCACTTGGTTGGGCTCGTCTTGTGCCGTCTCTTCCCCTAAAGCGACTGCACAGGCGGGAGGACCAGAGTAGCTTCAAGACCTGTGCAGTGGTCACCTCGGCGGGTGCCATCCTGCGCTCAGGACTGGGCAAAGAGATCGATACTCATGATGCAGTTTTACGATTTAACGCTGCACCTACAGAGGGATATGAGAGAGACGTGGGCAACAAAACCACCATCCGCATCATCAACTCACAGATTTTGGCCAATCCTAAGCATCGATTCAACACAAGTTCAATCTACAAGAATGTGACTCTGGTGGCCTGGGATCCTGCACCTTACACTGTCAACTTACACAAGTGGTATGCCAGTCCGGACTACAACCTGTTTGGTCCGTACACGGAGCACCGCAAGCTCCATCCCGGCCAGCCCTTCTACATCCTTCACCCGAGCTATGTGTGGCGACTCTGGGATGTGATACAGGGCAACACTCAGGAGAATATCCAGCCCAATCCTCCCTCCTCTGGCTTCATAGGCATCctcctgatgatggcgctatgCGAGCAGGTGCATGTGTACGAGTACATTCCCTCCATGAGGCAGACAGACCTGTGCCACTACCATGAGCGTTATTATGATGCTGCCTGTACACTGGGTGCCTACCATCCCCTCCTGTATGAGAAGAGCCTGATCCAGCGGATCAACACCGGCCCCGAGAGTGACCTCAGGAGGAAGGGACGGGTCACTCTTCCGGGTTTCAGCACCGTCAACTGTGAAATCTGAGATATGAAACCTGACCCCTCTGAGCccgaacatacacacacactccggcCTTTTCTGGCTGACTAAGGGAGAGGTGCAATAAAGCCACTGGCGACAAGGAGGCTGGAGCTTACAATATTCACATTAGACCCATGAAGAACATAAGCCATAGCCCTCCAGGGAGGGATCTACGTGGAGACTTCTGAAAGAATGTTTCTTCATTTTAAATGGTTTACTAGGCCAGAGACTGGCAGGTAGAGTCTCCAAGATGAAGCTAAAAAAAGACGTTTCTCTCTGCTTTAGCTGAGCCACGTTAGCTGTGGAGCTGACTAGGGTAGCAACAGATAAGTGTTTTTAGATAGACAAGTGAATTTTCAATAACTGGGTTGTGTCAATGGTGGTAAACTCTGTGTTTTTCAATAGTATGGGTGGTTCGCCACTTGAAGGAAATGCCACTGTTTATAACGTGGATccttgtgctttttctttttttaatggtcCAAAGGGTTGTGAATAAGCAAAGAAGTCATCCACGCTGAATGTCATAAATGCAACATACACTcacaaatatacaaacattCACACTTACATAGAGCAGCAACTCATGCAGAAGATCGCACAGTGTAAAAAGACCGTTTGGAGTCACACCAGTCAGATTACGCTCTGCAGCAGGTGTTGCCGTCCGACATTCCTCTATCGTCTTGTGAAATCCAACATGTTTTGTGTTGTCACGAGGGGTTTATTTCACACTTATAAGGCCTATTAAATTACCCTTCTGTGCATGCCAACTTGCCAGCTCACTACCACCTGTATGTCGCTCCTTGTTCACACTTAAATGATTCCTCATTCAGAGTCAAGAAGCCTGTCTCTCAATTACTAGCCCACAGGAAGGAAAACACTGGTTGCCCTTTATGGATTCATCCTACCAAtagtaacatttttttttaagcgtcATTAAATCAAAGTGAATGGGGCCTAAATGGATCTTCAGAACAAACTGGTGCTCAGAACAGCTGTAACCCTGTGCCTAGGGGTCGACTGAACACGTTCCTCGGGTTGCCTTGTGACTGTTCAGGTACATGCAGTACATACTGTGGCAGGACGCAGGTATGAAGCAGTTGATATTGTGGTGTCAGTGAGCTGTATCAGGGGATTCTCAGCTCTGCCTTTGGCATCACTAGCCCCTGTTTATGACAGTCAGTTCACTCTTTAttgaatgtaattttcccaCTGCGTGTAATGGCCAAACCCTCCCTGAAGCTCACCAATGCAGTACAGTATGGTCTGCGCATGTGCAGGGTTATTTCTTTATCATGTAACAGCATAAAGCTAATTTCCTGCAACTATTAATGTCTCATATTTGCTGAATTCTTTAATATTGGTCTGTGCCCATTCACAGCTCAGAGTGGAGACGATTATAAAAGAGGAAGTTGAACCGGTAATATTAGCAGATTTGCTTTGTCTCCAACTAGGATGGTTTTTATGATTACAGTGAGTCAGTGCCACATCTGCGGCAAGCTCTAGAGGTATTAGGTCAGCGTGGAGAGGAAGATTGGTTGTGATTTTTGCTGTAGACATTCAGAAAAATCTTGCCTATAACAGAGATTTCTATTGCTTAGTGTgcttttcaaaatgttcttgTGCCATTGGTTGTGGTTCGTTATAAGATGTGAAAACGTGTCTCAGAAATGTTGCTTTGAATAGTGTATGTTGAATTAGATGGCTCTGTAGTAGTATTATGTAGATGATTCTGGGGCTTAACATTACTTGTTgttgagtagggctgggtatcatccAAAATGTGTCAGTAGTACTACAAACAAGTACAGTGCTGataccaaaacaatgcattttttaaatttacaaaACACCCTTTTATAACTCAGGCAACAACTGATCAAAGAATAGAAAAAATACCTGAACAAGTTTTTGGTGCAAATTTTCTATATTTGTCGGGGTGGGTGATATAGATAAAAACCTCTAttatgatattttattttgcaacatTGACTATATCGAGATATAGTAAATTCTCTGGAAATTATGTTGAGAAACTatactcagttgccagtttattacaGTAGGTACAATTTGCTAAAACTAAGTctagtaaataaatataaattcattaaaatgaatcacagtggacaaaatattagaaaccCTACAATTGAATCAACATCTCTCTAAAACAGGATTTATTAGACagcattacttttagctagttGGAAAACTGGAAACTGAGTGTACATGTAGATAAAATAACCAGATGGTAATGACTAATTCAGTGAATTACATACATGACATAGGTATTTCATCACATTGATGCAAAATTCTGTAAATCTAATATTGCCACAAAGCAGTTGCCCTTATTGATACGCAGCTGCCTTAGTAGAAATTGTAAAGAAATATCTCTGACAGTTGAAAAACGGTCTCACATTACATATATggtcatatcgcccagccctactcaacAGTTTTTAATACTAAATTTAATGGATGCATTTTGAATACAAAAACGTAGTGAGGTTTGATACCCAGCCCCAGTTTCAGGTGGATTGTCTGGCATGTCATTAGAAGATTTTTGGAACAAGGAACCTGGTAAAAACAGGTAGATGACTGTAAAGGAGGTTTAAAAATGGACTatagaaaacatttttgaagcttaaagcaacactatgtaacttttcccgcttcggtccccctacaggttgtctcattggaactacagctcgcgctaaaagttacatagtgttgctttaatgagATTTATCAATTATTTTGGATCATGCAGGTTTTCAGCTCTGCTGTAGGTTTTATGTTTCTCTGTTCAGATAaataatcaaatgttttattgctTGTGATTGTAACACACTGAAGGTGAAAAACCCCTGAACATATTGTACATGTATATTTCTAATAACTTGGATTACTTTCCAATGCACAGAGCATGCAAATCAGGATCAGGGTAAGAGTCTTAAACTGTCCGTGCTGTACTGTGCTGCAAGTAGACACCATTGTCATTAATGTTGTGAGAGGCAATTGTGctataagatttttttttttccttaagtGTTGTTTTGCAGATTTTAGTGCATGTTTGTGGACAGGGAATCCCATTCAGCAGTGGTGCAGCTGTAAGTAGTTCCCTGGGAGCACTTGATTTAGTGCTATGCATTCTGGCAACTTTGTCTTCACATCTTAATATTGTGCCAAATTCCGTTTTTAAATATGTCTTAACGGACTCTAAGTAATAGCAGGACTTCTAAGGTGCTATTGCTTCTCTCTGGAATGTTTTAAGGTGGGATTTAATGGAAATTTTAATTCTCTTTAAGATAACAATTGTATTGCCAGGATTACATACAGGATATTGTGCTAAAACGTGAGTGGTGAGATTAGAGAAAAATCCATGAGAAATTTGCAGCCACTGTTTATTACGTTTTTCCCTCTCAGCCTCTTTCTCTCCACTCTTTACTCCCGAGGCCTAGTTTTCATGCCATGTTTTTACTCAGTATTGTGGGAATTTCTGTACCACACTGCCTCTAAAGGATTGTTtaacattttaagtttttttgtttacatttcccTTCTGCGGCTTCCTGCAGTACTCatgaaaagaggaagaggaaaaaaatgcaTCCATAGCTGAACATAGTaagagtgaaagtcctgtttttaCTCCCAACAGCCTTAGGATGTTCTTCTGGACTTTGATTTGTCAGTGAATTCTCTTACACTTGAATTGATATTTAAATAGACCATTTGTATGATTTCAGCTGTtgtaatttgtctttttttactgTGTAAATAAAGCTGTCGTACATGTCCAACTGTC

Function

symbol description
st6gal2 Enables beta-galactoside alpha-2,6-sialyltransferase activity. Involved in oligosaccharide metabolic process. Predicted to be located in Golgi membrane.

NR:

description
PREDICTED: beta-galactoside alpha-2,6-sialyltransferase 2

GO:

id name namespace
GO:0006486 protein glycosylation biological_process
GO:0097503 sialylation biological_process
GO:0032580 Golgi cisterna membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0003835 beta-galactoside alpha-2,6-sialyltransferase activity molecular_function

KEGG:

id description
K00779 SIAT2, ST6GAL2; beta-galactoside alpha-2,6-sialyltransferase (sialyltransferase 2)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039818013.1 True 5846 mRNA 0.44 7 21072178 21124442

Neighbor

gene id symbol gene type direction distance location
jam2b LOC108232408 coding upstream 37364 21025242 ~ 21034814 (+)
LOC120569739 LOC103352901,LOC102791869,LOC102207044,LOC101487838,LOC100703644 coding upstream 58845 21008677 ~ 21013333 (+)
tfdp1a tfdp1 coding upstream 65144 20996513 ~ 21007034 (+)
lamp1b LOC104951941 coding upstream 95302 20971296 ~ 20976876 (+)
pou2f1b pou2f1 coding upstream 118608 20937568 ~ 20953570 (+)
uxs1 uxs1 coding downstream 28038 21152480 ~ 21194144 (+)
LOC120570592 fhl2,LOC104956538 coding downstream 144811 21269253 ~ 21274628 (+)
mfsd9 mfsd9 coding downstream 221090 21345532 ~ 21352657 (+)
inpp4aa inpp4a,LOC106581879 coding downstream 245378 21369820 ~ 21386556 (+)
si:dkey-4e7.3 LOC103368133 coding downstream 274088 21398530 ~ 21406901 (+)
G125825 NA non-coding upstream 112216 20958707 ~ 20959962 (+)
G125826 NA non-coding upstream 114139 20953737 ~ 20958039 (+)
LOC120570516 NA non-coding upstream 160820 20903994 ~ 20911358 (+)
G125749 NA non-coding upstream 236424 20832494 ~ 20835754 (+)
G125738 NA non-coding upstream 246633 20795045 ~ 20825545 (+)
G125892 NA non-coding downstream 66590 21191032 ~ 21191666 (+)
G125903 NA non-coding downstream 82812 21207254 ~ 21207454 (+)
G125904 NA non-coding downstream 84517 21208959 ~ 21209742 (+)
G125915 NA non-coding downstream 151001 21275443 ~ 21275840 (+)
G125957 NA non-coding downstream 283071 21407513 ~ 21409113 (+)
G125757 rpl24 other upstream 206736 20860152 ~ 20865442 (+)
mpc2b mpc2 other upstream 213262 20853089 ~ 20858916 (+)
G125627 LOC108259060,LOC105016494,LOC108266561,LOC104955100 other upstream 550904 20492178 ~ 20521274 (+)
myo16 myo16,LOC103372229 other upstream 806588 20153855 ~ 20265590 (+)
LOC120569357 LOC103369896,LOC102289365,LOC102197623,LOC101484406 other upstream 1078854 19968360 ~ 19993324 (+)
sox1a LOC103372296,LOC101481640,LOC100691128 other downstream 494906 21619348 ~ 21634757 (+)
LOC120569986 LOC103372298,LOC100698342,LOC102199663,LOC102299751,LOC101469554,LOC102782232 other downstream 530684 21655126 ~ 21691804 (+)
fbxl3a fbxl3 other downstream 1606481 22730923 ~ 22738653 (+)
G126363 lmo7 other downstream 1682751 22807193 ~ 22815102 (+)
dachd LOC107389725,LOC105927577,LOC103357501,LOC103134744 other downstream 1854160 22978602 ~ 23100083 (+)

Expression


Co-expression Network