LOC120570212


Basic Information

Item Value
gene id LOC120570212
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 18947919 ~ 18953681 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039818442.1
ATGAGTCAGTCTCCATCCTACCAGAGAGATTCTTCCTCTGCATCTCCTGAGAGTCCTAAAGAAGGTGACATCTCCCCTCTACAGCTTTATGACAACCTGAAGAGCCTGGAGGAGCATGAGACATGTGACGACCAGAAAGATCCCATTGCCAACATCATAACTGACAACTACTCCAGCTCTCGTTTAAACACTCCGCTAGCGGCAAATGACCTTGGGAAGCTACGTGCTGGCATTGTTCTACAAGAACAAGCGATTAAGAAAAGTAATTGCAGAGAACTGAGATGCTTCAGTACATCGCCTATAAAAAAGAAGCCTCCGGTCTCACCAGAGTTCATGGAGGTGCTTGCGTTGGATGGAAGATTGATTACTTTGGTGAGCGCTCAGTGCCAGACAGATTGGGAATGGGTGGAGCAGagtctctctttcagctgtCAAGTTCAAAAGGAAATTGAAGATCCCCAGTTGTTGCAGGCAGAGGTGGTGAGCATGGACACTGTCGCTGATTCTTCTGAGGAGCCAGAGAATGAAAAGATTCCAAAGACGGAGCATGATATATCTTGTGTGGGTTCGCCTCGTCTCATAGCATACAAGCCAGAGCCAAAACAAACTTCTTATGTTGAAAAGGTTCCAGAGGTTGAATCTAAACAGGATGTGCTTCATGCTCAGTGTGACTATTGCCAGCAGCTCTGTCAGCCCTTTATACAAAGTGAACTGTTGGAAAATGAAACAGACTTTGAGAGGctCTTTTGTTGTGAGCTAGCTAAACAAATGAGAGAGCTTAtaattggagagagagagaaattggcAGAGGAGGAGTCAGACAGGAAGATTGATGTGAACCCGCATGTCCCTGTCATGAgtgaggaggagaggacagCTGCTAAAGAGCGGGCGAAGGAGAGGTTGAGACTTTTTCAACTCCAGAGAAAACCTAAAAAAGACAACTTGAATATAGACATGAGCCATATAGATGCCAAACATAACACCTGCCACAGGCTGTCAAAAAAGATTCCCTGTGTCAATAATGGGCCTCACATTCTTCAGATAAATATGAACAAGATTACTGACTTGTTTGAactacacaaagagacacatggTGAGCCAAAGCTCAAGTTCTACAAAAGTGGGAAAAGTTTTCTCATCTTGTTTCCAGATGGAACAGGGAATGTTTTTTATCCTTCTGGGAAAGCAGCCATTATAATATCATCTGCAGAAGATGCTGACTTCACTTACATTATCTTGGAGGACAAGGACGAAGCACCCAGCATCAAaggcattttcacaaataaaggcGACGCCATATGCTATCATCCCAATGGAAGGATGTGGTTGAATCTGACCCATGTTGGAGGTATCTGCTTCAGTGAGACAGGAGCTTTGAGGAGGCGCTGGAATTGGTTGTATCGTGCCCCGCATGTACGTAATCTTCCCTTCAAGCCGCTAACCTTTACCCTGGGCCAACACATCAGTGTGCGCATACACTCAAAACAACGCATGTACATTACCTTTTCATGTCAGCAGAACAGCGTGCACTTCAATGTGGGGTCAAAGCTTGAGctCATTTATCCAGAGAGCCATGACAAGCCGGGGCAAGACACTCTGCAGAGCTATACCAAAAAGAAGAGCTCAGAGATTTACTCTCTGCTTGGCCAGATGCAGACCTGCATGTCCCACCACTCTTCAAGCCTGAGCAACATTAAGCCACATTACCGTTTCATTGCCCAGACGCAAAAGGAGAAGTCACCCGAAACGATAAAGGCCAATGTAAATAAAGAGATAAATACAGACTAGGCAAAAGCTGATAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039818442.1 True 1805 mRNA 0.45 13 18947919 18953681

Neighbor

gene id symbol gene type direction distance location
cnmd LOC103352944,LOC102292237 coding upstream 11971 18931420 ~ 18935948 (+)
si:ch211-199f5.1 LOC104947498,LOC103352952,LOC100689962 coding upstream 16445 18927543 ~ 18931474 (+)
dct dct coding upstream 245367 18695106 ~ 18702552 (+)
sox21b sox21 coding upstream 270437 18675287 ~ 18677482 (+)
LOC120570426 abcc4,LOC103357783 coding upstream 296252 18611360 ~ 18651667 (+)
LOC120570209 NA coding downstream 3012 18956693 ~ 18962174 (+)
frmpd4 frmpd4 coding downstream 88470 19042151 ~ 19076783 (+)
tlr7 tlr7,LOC102778011 coding downstream 123508 19077189 ~ 19082770 (+)
LOC120569791 NA coding downstream 128452 19082133 ~ 19088916 (+)
egfl6 egfl6 coding downstream 150505 19104186 ~ 19112692 (+)
G125115 NA non-coding upstream 92889 18852566 ~ 18855030 (+)
G125114 slitrk5,LOC100690770 non-coding upstream 96124 18845407 ~ 18851795 (+)
G125110 NA non-coding upstream 118011 18829619 ~ 18829908 (+)
G125109 NA non-coding upstream 118393 18828933 ~ 18829526 (+)
G125104 NA non-coding upstream 119006 18828686 ~ 18828913 (+)
G125266 NA non-coding downstream 513751 19467432 ~ 19468790 (+)
G125267 NA non-coding downstream 537857 19491538 ~ 19586655 (+)
G125274 NA non-coding downstream 597677 19551358 ~ 19551941 (+)
G125369 NA non-coding downstream 794385 19748066 ~ 19814268 (+)
LOC120570225 NA non-coding downstream 838328 19792009 ~ 19801958 (+)
LOC120570507 NA other upstream 120372 18818753 ~ 18827547 (+)
G125079 NA other upstream 243391 18703028 ~ 18704528 (+)
hnrnpa3 hnrnpa3 other upstream 930506 18010757 ~ 18017413 (+)
hoxd10a hoxd10,LOC102792757 other upstream 1066591 17860160 ~ 17881328 (+)
myo3b myo3b other upstream 1749329 17127881 ~ 17198590 (+)
tmsb4x NA other downstream 135737 19089418 ~ 19090785 (+)
igsf3 LOC103352919,LOC104967650 other downstream 434334 19388015 ~ 19459274 (+)
LOC120569357 LOC103369896,LOC102289365,LOC102197623,LOC101484406 other downstream 1014679 19968360 ~ 19993324 (+)
myo16 myo16,LOC103372229 other downstream 1200174 20153855 ~ 20265590 (+)
G125627 LOC108259060,LOC105016494,LOC108266561,LOC104955100 other downstream 1538497 20492178 ~ 20521274 (+)

Expression


Co-expression Network