cfap97d2


Basic Information

Item Value
gene id cfap97d2
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 23657254 ~ 23663191 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039818471.1
CCCATTCACAGCGCATCACTTTTGAAGCCTGTTGATTTAAAAGCTGCTGTCATGGCAACCATGTATGACTGGCAGAAAACAGACTGCAGACTCTGAGCTCCAGTCAACCTGGACGCTGCAGAGCATGAACACACTCTCATGGGCAGATGAAGGGTTGTGATATTGAGACACCAGGGCAGCCACAGATTGTGAGGACCATGATGGCGCATCTGGCATATCAACCCCTGCTTCCCACCGGAAACAAATATCTGCAGCAGAAATGGGACAAGGCTTCATATGATTTACATAGGGAAAAGGTGAAGTCAGCTAAACCAACAATAAACACCACTCCACCAAAGACCTATGTTCACCTGGCTGTCAAGCTGAAGAAACAAAAGCTTGAAGAGGAATGGACAATGAAGATTCAGAGGGAAAACAATATGCTTATGGAGAAAATAGCACACATCATGAGGACAACTGGAGAAATTGACAACAAGAATTATGAAAGAAAAAGCCTTGGCAAGGAGAAGCGACAGCTGGAGTTGCTCCGTATTACCAAGGAGAATCAAATGATCCTGTCCCGTCTGAGCCAGTGCAGGTCTCACTATAATCTGAGGAGCTGGCATGAGGACTGGCTCAAAACTCTCAAGGTGATGGACAGCATTGCACGTTACCCACGAGGAAGGACAAATGAGCAAAAGGGACAAGAAAACTCCATTAAGAAGCACAATGATATTGATAAAGAACAAAAGATCAGTGCTGATGCAGCCACACACAGCCCTGCAAGCAACAAGGTCAATGAAAAAGCAGAGTCTGAGGAAAATGAAAACAGTAAAGAAACCAGCAAGAAGGGAAGTACAGGAACAGAAATACAGCAGGACATGGCGACATACCCTGAGTCCAAATGCACCTGAGGAATCCATCTCACCAGATGCACCTAAGAATCCTGGTTCTTCTGACATCCTTTAACTTACAGCAGACAAACCCCGCTCACACTGCTGACTCATTTTCCTCTTCTGATGGATCTGATATGTCTAGCACTCCTCACACACCTTAAACACCCAAGCAGGAGACTGCAAGTCCTGCAGAGGGATAAAATGCCTTGTTCTTTTGGCAAACTCGTTTATCTGCACATTAAAGAGACTATGATAGTTTCACtataagctgttttaaaaaaGACAATCTTATCTACAGAGAAattgatatatactgtatggtaCTCTCATATAGTGCAGGAGAAGTACTTTGTATAGGCTGTGTAGCCTACCAAGATAAATTCATGGACTTTTCTGGTTTAGAGAATTCTAACAAACAATATgatgacctttttttaaatttgt

Function

NR:

description
PREDICTED: uncharacterized protein C17orf105 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039818471.1 True 1319 mRNA 0.43 7 23657254 23663191

Neighbor

gene id symbol gene type direction distance location
itgbl1 itgbl1,LOC102787049 coding upstream 118590 23494941 ~ 23538664 (+)
zic2a zic2 coding upstream 409594 23243632 ~ 23247660 (+)
clybl clybl coding upstream 435013 23159965 ~ 23222241 (+)
klf12b klf12 coding upstream 696500 22914201 ~ 22960754 (+)
tbc1d4 tbc1d4 coding upstream 769866 22856950 ~ 22887388 (+)
cdc16 cdc16,LOC102786741 coding downstream 149 23663340 ~ 23677275 (+)
upf3a upf3a,LOC104960519 coding downstream 16467 23679658 ~ 23689877 (+)
p2ry8 p2ry8,gpr82,LOC103134757 coding downstream 27645 23690836 ~ 23695194 (+)
asmtl NA coding downstream 32196 23695387 ~ 23703927 (+)
ppp2r3b ppp2r3b,LOC100705877,LOC102783484,LOC107099188,LOC102198241 coding downstream 241945 23905136 ~ 23929409 (+)
G126463 nalcn non-coding upstream 256868 23399891 ~ 23400386 (+)
G126447 NA non-coding upstream 304434 23352577 ~ 23352820 (+)
G126439 zic5,LOC102789084 non-coding upstream 420431 23232867 ~ 23236823 (+)
LOC120569671 NA non-coding upstream 688084 22966626 ~ 22969170 (+)
G126358 NA non-coding upstream 858942 22797901 ~ 22798312 (+)
G126515 NA non-coding downstream 41194 23704385 ~ 23704642 (+)
G126516 NA non-coding downstream 41752 23704943 ~ 23705702 (+)
G126519 NA non-coding downstream 47212 23710403 ~ 23711118 (+)
G126520 NA non-coding downstream 50297 23713488 ~ 23713977 (+)
G126563 NA non-coding downstream 282953 23946144 ~ 23947968 (+)
dachd LOC107389725,LOC105927577,LOC103357501,LOC103134744 other upstream 557171 22978602 ~ 23100083 (+)
G126363 lmo7 other upstream 842152 22807193 ~ 22815102 (+)
fbxl3a fbxl3 other upstream 918601 22730923 ~ 22738653 (+)
LOC120569986 LOC103372298,LOC100698342,LOC102199663,LOC102299751,LOC101469554,LOC102782232 other upstream 1965450 21655126 ~ 21691804 (+)
sox1a LOC103372296,LOC101481640,LOC100691128 other upstream 2022497 21619348 ~ 21634757 (+)
cwc22 cwc22 other downstream 520758 24183949 ~ 24199835 (+)
sestd1 sestd1 other downstream 613966 24277157 ~ 24298218 (+)
fzd5 LOC104950716,LOC108238837 other downstream 709280 24372471 ~ 24394985 (+)
cacnb4a cacnb4 other downstream 1966916 25630107 ~ 25664427 (+)
G127165 LOC100691947,LOC102776592,LOC101469272,LOC102213137 other downstream 2453797 26116988 ~ 26129879 (+)

Expression


Co-expression Network