G234152


Basic Information

Item Value
gene id G234152
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 11336610 ~ 11341839 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU317961
GATGGTGTAGTGGTAAAGGAATGGCTTGGAACTCAATAGGTTGGTGGTTCTAGTCCTGCTCAAGGCTGAGACTGAAATTtaccaaaaaaaagtcattttttgcctaaaaaagtgaaaaaaataatattttttttccttttccacaTTTTGCCTGGCTCCTCTATCTCCTTCCCACGTTCCCtgtctccatctccatctctgtaTCCCGGCCACACTTCTCCTACTTTTGGGAATCTCGTTCGTTTAGCCGGTCAACTCAACTCGTTTCACACCATCTTTCGGGATTTTTGTTTCTGGGAATCtcgtttgtgtctctctctctctttcgctccTCTGACTTAGCTCACTTTCCACCAACTTTCGCCGTTTGTATCTCGTTCGATTCAGAGTCCTTCCTCGCAGACCCAGTTCAGTCTTGAACTCGCAACTTTGCCGTTCTAAGGCCCTCGCCTTTCCACTGCACCATCTTTCGCATACATGTCATGACCGGGTTATGTCCGCTTTGATGGTGCAGTAGTAAGCATTCATGaggacaaactgaaaaaagagATTCCTTGCTGGATTTGAACTAACAACCTGTGGCACAACAAATCACCGACATCTCCACTACACTACAGTGATGATAACTCAGTTTGTTCAGTTTgttcacatgaatgcagcagcaGGTGTTCAAGAGGACAGATATAAGAAAAAGTAGGCCATAACTAGATTTGAACCAAGAACCTTTGGAGTCACGTATCATCGATAATACCACTACACCACAGCAGAGATGCCAGTGGAGCTTTAGTTTGTTTTGATGAATGCAGCAGTAGGTGTACAAGAGGACAGATTTAAAAGAATAGTTGACTGTTGGATTCAAACCAGGAACCTTTGGAACCATGTACCATTGACTCTGCCACTACACCATAGAAGAGATCCTCATGCAGCTTTAGGTTGTTGTTATGAATGCAGCAGTAAACATTCATGaggacaaactgaaaaaataatctACAGGGGGATTCAAACCAACAACCTTTGCAACCATGTACCCAGAACATTGCCTCTACACCACCATTGAAAAACTGCAAATGAAGTCCATTTTTGCTCCAAAGAATAATCACTAGTCAGAAATGTTGAATATTTGGTTTAAATTGGGTTTTCTACTTATTGTTTGAGTGAAAATAATGCCACATTACGCAACTGTGTGCCAAAGAAAGTTTTTCtccaatttataaaaaaaaaaaaaatagggtaCATAACTGGTTTCAAACCAAGAACCTTTGCAATGCTGCATCCATAATTTTACCACTACACTATCATCGATTCACTGCACTGACCTGTCGTCTTTGTCCCAAAGAATAATTACTAGTCAGAAATGTTGAATTTTTGGTTTAAATTGGGTTTTCTACTTATTGTTTGAGTGAAAATAATGCCACATTACGCAACTGTGTGCCAAAGAAAGTTTTTCtccaatttataaaaaaaaaaaatagggtcCATAACTGGTTTCAAACCAAGAACCTTTGCAATGCTGCATCCATAATTTTACCACTACACTATCATCAATTCACTGCACTGACCTGTCGTCTTTGTCCTAAAGAATAATCACTAGTCAGAAATGttgaatatttattttaaattgggTTTTCTACTTATTGTTTGAGTGAAAATAATGCCACATTACGCAACTGTGTGCCAAAGAAAGTTTTTCtccaatttataaaaaaaaaaattgagttcATAACTGGTTTCAAACAAACAACATTTGTGATGCTGCATCCATAACTTTACCACTACACTATCATTGATTCACTGCACTGACCTGTCGTCTTTGTCCCAAAGAATAATCACTAGTCAGAAATGTTGAATATTTGGTTTAAATTGGGTTTTCTACTTATTGTTTGAGTGAAAATAATGCCACATTACGCAACTGTGTGCCAAAGAAAGTTTTTCTCcaatttataaaaaagaaaagagagtcCATAACTGGTTTCAAACCAACAACCTTTGTGATGCTGCATCCATAACTTTACCAATATACTATCATCAACTCCTTGTACTAGCTTGTCGTCTTTGTCCTAAAGTATAATCACCAGTCAGAAATGTTGAATATTTGGTTTAAATCTGGGTTTCTACTTGTTATTTGAGTGATAATAATGCCACATTACACAAGTGCGTGCCAAAGAAAGCTTTCATTCAGTTTATAAGAACACAAAAAAACTTGGCCATAGCTGGGGATTCAAACCAAGAACCTTTGTCTTCCTGTACCAATGCCATTGTCTCTACACCACCATCGAAAGACTGCAGCATGAGTTCATCTTTGTCCCAAAGAATAATCACTAGtcagaaatattaaatatttggtTTAAATCTGGGTTTCTACTTATTGTTTGAGTGATAATAATGCCACGTTACGCAACTGTGTTTCAAACCAACAACCTTTGTGGTGCTGCATCCATAACTTTACCACTACACTATCATCAATTCACTATGCTACCTTGTCGTCTTTGTCCTAAAGTATAATCACCAGTCAGAAATGTTGAATATTTGGTTTAAATCTGATCTGGTAATTGACCTGTCAATTGGTTGATTAATGTATTAATTGATTGGTGAATTTGTTGATTACTCAATTGATTAATTAGGAATAGCTCACTGAGATAAATTACTGACTCAATAATCTGAGATTGAAGGATTGAATTCCACTTTTGTCTTGGCAGTTTTTCATTTCTCTCCTCTGTAGTgtgaacaataaatacaacttCCAACCTTGTCTCAATTTCTAGGGACCTTCCTTTCATTCTAGGTCTAGAAGGTATAGCCttctatgtgtttatttctctGGCTATGCTTTCAGTTTATGTGTCTGTTCCTCTGTCTAAGAGGGCAGCATGTGGCTCAGAGTGTTGGGAGTTTGGCCCTTTTCCCCGAGATTGCCGGTTCAATACGGGGCCTGGTCCTCCCTGTGCTAAATCCCGAAATGCTCTGGTTTGATTTTGGTCTTAATGTTAACATTACTGAACTTAATATTTAGTGCCCCTCAAAAGGATCAAACTCACAACCTTCTGAACAGACCACAAGGTATTCATTGCTCTGTGCTATTTGTGAAGCTGGCAAAGTAGCAGTTTAaggttgtatttattgttcacATTGCTGAGGAAACACTCCAATGACAGATGGGTTTTGATCCAGCAACCTGGAATTGACATGCCAGCTACTTATCCTGATATCCAAGTTCTTCCAGCATGCGATGGTGCCATCAAACTCTGCTTGGCTCCTGTAGTTTGTGGTTCAGGTTGGGGTCAGTGAAGCATTATTCTCCAATTCCTCTGCCCACTGGTTTTGGTTcttaatgtttatttaattaattgtttgtgttgtgtatgtttgGTTCCATTCAAATCATATAAACTGGCTCATGCACTCCGGTTTTCCCATCTGTAATACATATTattagatttgttttttaatttttaaattagaGATAGATATGTGATAAATTAGTGGACAACTTGTGTTTAATTTCAGTATTTGCAGACAATGATTTACATTAATGGAATTAGTCCATTAACATCTATTGTAACAACACAGGTTTTTGCACCACCTTTTAACAAATCCAGTTCCCTTTCGATATGTTTGGAAAAAAGAAATGATCAACAAAACACCACTTGGACAATTTCTCATTTAGCATTTATGAAAAAGAAAGGAGGCATTATTACATAACAGTCCATATATAATTTtgtatgataaaacaaatggtcaaaaatAATTAGGTTACATCTAATCAATTATGAGTACAGTAACAGGAATATTCCATATATTAATGACAATTTGTTTGCTTTATTACTGTGCAAAACAAAATATACATATCTACTGAATGTGTGAGAAGTACAGTATCAGTGAATGGGCCCACGTAGTGACACAACGCTCGTTTTACATAACTAATCATATGACAACAAAACGACTTAATGTTCCTATAAATACTCCTGTTTGACGATGAattccaacaaaacaagttaTCAACAGTAAGATGCTATGTTTTTAGTCATTTTCTGGTGTGTCTGAGCCAAATATTACTTAATGATATGCAACGTCACCAACCCAGGTCTTATAATAATGTGTCCCCTTTGGAAAACTAGCTGCAAATATTGtatcaggggaaaaaaagaaattagagAAAAATCAAAGAAACAGGAACATTTGATTGACAAGAATTTGTTAAACATAGACAAATAATGTAATAGCTCGTAATATGGTGGATTTAATCGTCACCCCTGCCTCATCTAGGTCAAGTCGCATCACAAGGCTGCTACGGAGGCTCTTAGTCAAATCCACGGTTTCATTCATCAGTCAACACATGGTATTGTCAACGCATATGAGGGAGATAACAAGAGGCCTGCCAGAGGCCACGCTGCTCCTTAGAACTGCCTGGACCAACATCACCATGTAGCGCTAATAAAACAATACCGATTCAATGTGTAGGTCCACATGTGATcaatgagttaaaaaaaaaaataggaaaattccACCCTCAAATCATTTTTTGATATCtatttcccagaatgcctttTTTTTGGCAACTTGAATGAATATTGAGTAGTACTGTGACTATCTCTGCCTCTTCTGGGATTTATTTCTCCAAAGGTGTATGTGAAATGGCAACTGACCTGTGTGTCCTCAAACCAGCGTTCCATCAGACTGAGCTATCTGATCTACTGCACTACTCTTTCGAGTATTTGACTTTTCCCTTCCAGTTTTAGACTTTGAAAATTGACAGCACCTCAGAGAGCTTGAACTCTCAACCTCCAATTTTCTTGAGACTTTAACCGTCACCTTATTTTGCTGCGCTATCTGCAAAGGTCGCAAAAAGTTTGGTTGGAAGTTGTATTTATCGTTCACATTTCAGAGGAGAAAAGTTGAAAAACAGGATTGGATTGGATCTCACAACCTCAGATTGTGGAATCAGTAGCTTATCTCAGTGAGCTCTTCCTGAAGCTGTCATATCACATGTTGGTTCTATTATTTGTTGTTCACACTTTGTATTTGTCTATTCCTATGTGTGTCCTATCCAACATCTTCTCTGTGCCAACCTCCGAGCATGAATTTACAGAAAAGGCTTTTCATATTGGAGGAGATAGCTCAGTGTGATAAAATGCTGGTTTAAGCAAGCACAGATCATGGGTTCCATCATTCTGACAGACAATTTATTTAGAGGTTTTACACCCAAAAAATGTACATCCACTTTCATGGAATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU317961 True 5230 lncRNA 0.37 1 11336610 11341839

Neighbor

gene id symbol gene type direction distance location
LOC120554143 LOC104935050 coding downstream 13524 11314682 ~ 11323086 (-)
LOC120554144 NA coding downstream 22466 11306761 ~ 11314144 (-)
arpc2 arpc2 coding downstream 61628 11265556 ~ 11274982 (-)
LOC120554137 NA coding downstream 75958 11253646 ~ 11260652 (-)
LOC120554135 NA coding downstream 104226 11230221 ~ 11232384 (-)
LOC120554162 ctdsp1,LOC104928328,LOC104957766,LOC103148703 coding upstream 29114 11370953 ~ 11387252 (-)
LOC120554150 NA coding upstream 128612 11470451 ~ 11502481 (-)
tns1a NA coding upstream 225732 11567571 ~ 11684433 (-)
LOC120554155 ccnyl1,LOC103374641,LOC104957757,LOC101466371,LOC100696912 coding upstream 366488 11708327 ~ 11715150 (-)
LOC120554156 LOC104957759,LOC101074451,LOC100697446,LOC103389560 coding upstream 376342 11718181 ~ 11724139 (-)
G234080 NA non-coding downstream 2521 11333367 ~ 11334089 (-)
G234078 NA non-coding downstream 4050 11332281 ~ 11332560 (-)
G234063 NA non-coding downstream 29907 11305611 ~ 11306703 (-)
G234051 NA non-coding downstream 51520 11284792 ~ 11285090 (-)
G234032 NA non-coding downstream 184059 11151842 ~ 11152551 (-)
G234153 NA non-coding upstream 2122 11343961 ~ 11345876 (-)
LOC120554171 NA non-coding upstream 277995 11619834 ~ 11620856 (-)
LOC120554169 NA non-coding upstream 279030 11620869 ~ 11621353 (-)
G234181 NA non-coding upstream 342783 11684622 ~ 11685167 (-)
G234194 NA non-coding upstream 456724 11798563 ~ 11822502 (-)
LOC120554131 NA other downstream 197365 11136627 ~ 11139245 (-)
LOC120554127 NA other downstream 289651 11037355 ~ 11046959 (-)
G233954 NA other downstream 367500 10948468 ~ 10969110 (-)
si:ch211-132g1.7 ptgfrn,LOC104953994 other downstream 811525 10464322 ~ 10525085 (-)
LOC120554082 NA other downstream 948677 10383688 ~ 10387933 (-)
spega LOC103358966 other upstream 46713 11388552 ~ 11441926 (-)
LOC120554153 LOC101072154,LOC104957764,LOC103371815,LOC107377212,LOC108242182 other upstream 117098 11458937 ~ 11489477 (-)
igfbp5a igfbp5,LOC103371819,LOC104928322,LOC101465019 other upstream 182543 11524382 ~ 11538321 (-)
G234253 LOC103139183,LOC106940425,LOC106914874 other upstream 936680 12278519 ~ 12293143 (-)
G234405 NA other upstream 1611251 12953090 ~ 12954125 (-)

Expression


Co-expression Network