G236282


Basic Information

Item Value
gene id G236282
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 20383151 ~ 20394034 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU320560
CTCGGGGCTTTGCGGGGTCTGTGGGGTGCACTGCAGGTTTGTCTGGTTTGGGGTTGGGGTCTGGACCCAGAGCGTCCTCCAGATCTAACCCAAAACCACCAGAATCTCCAGAACTCGGTTTCTTGGGTTTTTTAGTCGGAGCTGGCTCATCTGGTGCAAACGCATCGGAGAGGTCCAGCCCCCCGTCGGTTTTGGGTTTCTCGGGAGCCTTGGGCTGCTCTTTGGGCTTTGCAGGTGTTGGTGACGGCGCCAGATCATCCAGAGCGTCGGACAGGTCCAATCCGTCGTCTGTTAATGTCCCagcaacaagaagaagaagaagcacacCAATCCTCAAACCGATCATGTTGACGGTAACTGggctctttcttctttctttaaaGTCAAACTTCTGGAGCGACGTTTTCAGGCTTCAGCTGCAGATATTTGTGGCCTCAGACTGCAGGGCAAACCTCGCCTGGTGTCCTCTTACAATTTGTTATGAGTCAACTTTGCCGATGAAGGAGTGGCACACGGTCGGGTGTGGCTGCCTGCAGCCTTTCAGAGTATGGGAGCACATAAGAGTCAGTAATATTCacagtttggattttttttttttttagctatagATTGATTTGTGCATCTCAAAATAGTGACTTAGTATCTCCATTTGTTTGTGATTTTATAATTGAG

Function

GO:

id name namespace
GO:0006974 cellular response to DNA damage stimulus biological_process
GO:0033554 cellular response to stress biological_process

KEGG:

id description
ko03440 Homologous recombination
ko03460 Fanconi anemia pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU320560 True 672 lncRNA 0.49 7 20383151 20394034

Neighbor

gene id symbol gene type direction distance location
dhrsx dhrsx,LOC104961879,LOC108244136,LOC106908010,LOC106908011 coding downstream 2659 20375593 ~ 20380492 (-)
pnpla4 pnpla4 coding downstream 627182 19749071 ~ 19755969 (-)
aox6 NA coding downstream 728839 19622102 ~ 19654312 (-)
bzw1a LOC107384676,LOC108245120,LOC107082828,LOC103371116,LOC101480137,LOC103457358 coding downstream 761500 19608622 ~ 19621651 (-)
kynu kynu,LOC102785701 coding downstream 801893 19551436 ~ 19581258 (-)
LOC120554635 LOC104961873,LOC103363323 coding upstream 48947 20442981 ~ 20456063 (-)
LOC120554361 NA coding upstream 400312 20794346 ~ 20802270 (-)
vps16 vps16 coding upstream 459531 20853565 ~ 20867800 (-)
dytn NA coding upstream 571904 20965938 ~ 21075255 (-)
ftcd ftcd coding upstream 596856 20990890 ~ 21003269 (-)
G236279 NA non-coding downstream 9910 20373000 ~ 20373241 (-)
G236261 NA non-coding downstream 70324 20305493 ~ 20312827 (-)
G236249 LOC103376870 non-coding downstream 110417 20271475 ~ 20272734 (-)
G236248 LOC104951987,LOC103359801 non-coding downstream 111738 20270484 ~ 20271413 (-)
G236247 NA non-coding downstream 114484 20267867 ~ 20268667 (-)
G236293 NA non-coding upstream 83152 20477186 ~ 20479038 (-)
G236294 rcan1,LOC106534915,LOC103389732 non-coding upstream 85121 20479155 ~ 20480319 (-)
G236303 NA non-coding upstream 115193 20509227 ~ 20511076 (-)
G236309 NA non-coding upstream 143867 20537901 ~ 20538114 (-)
G236310 NA non-coding upstream 146421 20540455 ~ 20540699 (-)
G236277 adarb1,adarb1b,LOC105907970,LOC107754003 other downstream 14718 20367341 ~ 20368433 (-)
G236111 sts,LOC108241831 other downstream 650614 19731319 ~ 19732537 (-)
LOC120554050 f2,LOC106587117,LOC106561958,LOC100136077,LOC101463683,LOC102200345,LOC102207201 other downstream 853909 19523504 ~ 19529242 (-)
LOC120554371 mbd5,LOC102784158 other downstream 1943733 18404226 ~ 18439418 (-)
LOC120554370 LOC103370263 other downstream 2056048 18271078 ~ 18327103 (-)
G236340 NA other upstream 332369 20726403 ~ 20728427 (-)
G236349 NA other upstream 366674 20760708 ~ 20760992 (-)
rgn LOC103371141 other upstream 449458 20843492 ~ 20853383 (-)
G236646 NA other upstream 468646 20862680 ~ 20863311 (-)
LOC120554644 NA other upstream 498880 20892914 ~ 20920498 (-)

Expression


Co-expression Network