LOC120554156 (LOC104957759,LOC101074451,LOC100697446,LOC103389560)


Basic Information

Item Value
gene id LOC120554156
gene name LOC104957759,LOC101074451,LOC100697446,LOC103389560
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 11718181 ~ 11724139 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792842.1
TCGTCGTCTCCCTCGTCCTCCTCTCCGTGTTGTTGTTCTCGGTGACGCGACGGAGGTGTAGCCTGACGCGGTCTCTTACGTGTCGGTCTGAATAAAAGTGGAGCTCCGTAGACCCGGGAGTGACGAAGCGAGTCTGTGTTGATTTTAAACGACAATGGAGGCTGGTGCAGACACACAGCAAAGTGGTGAAACAGTTGTCTCAGAGTCTGAGACCCAGCAGATCACCATTGGACAGACAGGGTATGAATGTGGGTTGTCATGGTTGCAGGCGTCCATAGCAGCTGGCCAGGTGACATCCAGCGGTCCCACAGTCACCCTTGTGCAGTTACCCAACGGTCAGACAGTCCAAGTGCACGGGGTGATCCAAGCTGCTCAGCCCTCTGTCATCCAGTCCCCACAAGTCCAGACTGtacagATTTCGACTGTTGCTGAGAGCGAGGACTCTCAGGAGTCTGTAGACAGCGTGACAGATTgtcagaagaggagagagatcctGTCCAGACGTCCTTCTTACAGGAAGATTCTGAATGATTTATCGTCGGATGCTCCAGCAGTGCCTCGAATTGAGGAAGAAAAGTCTGAGGACGACACAGCCCCTGCCATCACCACAGTCACCATGCCCACTCCCATCTATCAGACTAGCAGTGGCCAGTACATTGCCATTACCCAGGGTGGGGCCATCCAGCTGGCCAATAATGGCACAGATGGAGTGCAGGGCCTGCAGACGCTGACCATGGCCAACGCCGGCCAGCAAGGTGCCACCATCCTGCAGTACGCCCAGACCAGCGACGGGCAGCAGATCCTAGTGCCCAGCAACCAAGTGGTTGTACAAGCCGCCTCAGGTGATGTCCAGGCCTATCAGATACGCACAGCCCCCACCAACGCCATCACTCCTGGGGTTGTCATGGCGACTTCGCCCGCGCTGGGCACAGGAGGCGGCACTGAGGAGGTCACACGCAAAAGGGAGGTCAGACTTATGAAAAACAGGGAGGCCGCCCGCGAGTGTCGCAGGAAGAAGAAGGAGTACGTCAAGTGTCTGGAGAACCGCGTGGCCGTGCTGGAGAACCAGAACAAAACCCTCATCGAGGAGCTCAAAGCCCTCAAAGACTTGTACTGCCACAAATCGGAGTAGAAAACGTCGCCAAAACCGCCTGCCAGGGGCTCGACAGGTGCCCGTCTGTCCCCATGTACAGAGACTCAGCACAGAGCCATGCATCTGGATAACACTCCCCACCCCTCCACCCCACCCCTTTTCTActcttttgctttcttttttaaaaactgcTGAGAAATCTTTAAAGTGACTCACCAGGATTAGAAAAACcaaccacccccacccccatcccCCTTCAGCGATCAGTCAGAGAAGCAATGTTCAGAGCAGACGCGTGGAGGAGACTCCAACTATACAGGGTCCTCGTGGTGAAGTGATGGAACGGACAATGAggctgttgtgttgtttttttttggacgccaccaaaaaaaaaaagggaagcatTCCAGTCACTGGTGCCTGGACAAACTAGGCAACGTCACCAGCAACGGGGGGGAACTGCTCACTTTAACCATCACCACCAACAAACGACAGAACTTTTTACGTCAGAACGTTTAATCTCCCCCAAGACACTCGGATCATTTGGAGAGGTTACTTTTGTGTGCAATGTTTGTAACCGTAACTGCGCTCTTTGCATTAACATCTGTTACTTAACTAATGCTTTGAACTGTAGATGGGCCGCGCCACGGACATTTTTATCTTTTAGCTGTGATTTGTTTCATGTATTGGATTATCTGCTTGCATAATgccaatgacttttttttttttactttgaattTACTTTGCCTTGATAtgacatgaacaaaaaaaaaaaacccgctAACCATTACGTAAGGTTGTAGATGGTTTCCGTGTTAAATGCAGCTCTGAAAGAGCGCGATGAAGAGAGACCGTAAGTCAAACCGTCTCTCGAGTGGAACTCTTTAAGTGTTTATTTGGTCTCTGATGCATGTCCCTTCCTTCCCAATCATATGACTAAGGCTCATTAACAAAAACATCCCCATAAAAAAGGAGCAGAATAGTTTAAACAGATTTAAACATGGTTTATGTGCTCACCGGAGGTCACGAGTAAACTGGCTCCGTGGATTATGGATTTTTCAatccatttttttgtatttgttatttgATTAATTCCTGGATTCTTCttgaataaaacagaaaaataa
>XM_039792843.1
GGATACGCATCCGAAGTTTGCTAAACAGATAGATGGCTGCCCAGAGAAGTTATTTGCGGCTAATATCCGCACAAAGCCAACAAAGAGATCATGGCGGCGGTGTTGCAGAGGCTCTTAAAATGAGTCAGTCTCTGCAAGGCTCGCAACACAACTGAGACATAGATTTTAAACGACAATGGAGGCTGGTGCAGACACACAGCAAAGTGGTGAAACAGTTGTCTCAGAGTCTGAGACCCAGCAGATCACCATTGGACAGACAGGGTATGAATGTGGGTTGTCATGGTTGCAGGCGTCCATAGCAGCTGGCCAGGTGACATCCAGCGGTCCCACAGTCACCCTTGTGCAGTTACCCAACGGTCAGACAGTCCAAGTGCACGGGGTGATCCAAGCTGCTCAGCCCTCTGTCATCCAGTCCCCACAAGTCCAGACTGtacagATTTCGACTGTTGCTGAGAGCGAGGACTCTCAGGAGTCTGTAGACAGCGTGACAGATTgtcagaagaggagagagatcctGTCCAGACGTCCTTCTTACAGGAAGATTCTGAATGATTTATCGTCGGATGCTCCAGCAGTGCCTCGAATTGAGGAAGAAAAGTCTGAGGACGACACAGCCCCTGCCATCACCACAGTCACCATGCCCACTCCCATCTATCAGACTAGCAGTGGCCAGTACATTGCCATTACCCAGGGTGGGGCCATCCAGCTGGCCAATAATGGCACAGATGGAGTGCAGGGCCTGCAGACGCTGACCATGGCCAACGCCGGCCAGCAAGGTGCCACCATCCTGCAGTACGCCCAGACCAGCGACGGGCAGCAGATCCTAGTGCCCAGCAACCAAGTGGTTGTACAAGCCGCCTCAGGTGATGTCCAGGCCTATCAGATACGCACAGCCCCCACCAACGCCATCACTCCTGGGGTTGTCATGGCGACTTCGCCCGCGCTGGGCACAGGAGGCGGCACTGAGGAGGTCACACGCAAAAGGGAGGTCAGACTTATGAAAAACAGGGAGGCCGCCCGCGAGTGTCGCAGGAAGAAGAAGGAGTACGTCAAGTGTCTGGAGAACCGCGTGGCCGTGCTGGAGAACCAGAACAAAACCCTCATCGAGGAGCTCAAAGCCCTCAAAGACTTGTACTGCCACAAATCGGAGTAGAAAACGTCGCCAAAACCGCCTGCCAGGGGCTCGACAGGTGCCCGTCTGTCCCCATGTACAGAGACTCAGCACAGAGCCATGCATCTGGATAACACTCCCCACCCCTCCACCCCACCCCTTTTCTActcttttgctttcttttttaaaaactgcTGAGAAATCTTTAAAGTGACTCACCAGGATTAGAAAAACcaaccacccccacccccatcccCCTTCAGCGATCAGTCAGAGAAGCAATGTTCAGAGCAGACGCGTGGAGGAGACTCCAACTATACAGGGTCCTCGTGGTGAAGTGATGGAACGGACAATGAggctgttgtgttgtttttttttggacgccaccaaaaaaaaaaagggaagcatTCCAGTCACTGGTGCCTGGACAAACTAGGCAACGTCACCAGCAACGGGGGGGAACTGCTCACTTTAACCATCACCACCAACAAACGACAGAACTTTTTACGTCAGAACGTTTAATCTCCCCCAAGACACTCGGATCATTTGGAGAGGTTACTTTTGTGTGCAATGTTTGTAACCGTAACTGCGCTCTTTGCATTAACATCTGTTACTTAACTAATGCTTTGAACTGTAGATGGGCCGCGCCACGGACATTTTTATCTTTTAGCTGTGATTTGTTTCATGTATTGGATTATCTGCTTGCATAATgccaatgacttttttttttttactttgaattTACTTTGCCTTGATAtgacatgaacaaaaaaaaaaaacccgctAACCATTACGTAAGGTTGTAGATGGTTTCCGTGTTAAATGCAGCTCTGAAAGAGCGCGATGAAGAGAGACCGTAAGTCAAACCGTCTCTCGAGTGGAACTCTTTAAGTGTTTATTTGGTCTCTGATGCATGTCCCTTCCTTCCCAATCATATGACTAAGGCTCATTAACAAAAACATCCCCATAAAAAAGGAGCAGAATAGTTTAAACAGATTTAAACATGGTTTATGTGCTCACCGGAGGTCACGAGTAAACTGGCTCCGTGGATTATGGATTTTTCAatccatttttttgtatttgttatttgATTAATTCCTGGATTCTTCttgaataaaacagaaaaataa
>XM_039792844.1
CGTCGTCTCCCTCGTCCTCCTCTCCGTGTTGTTGTTCTCGGTGACGCGACGGAGGTGTAGCCTGACGCGGTCTCTTACGTGTCGGTCTGAATAAAAGTGGAGCTCCGTAGACCCGGGAGTGACGAAGCGAGTCTGTGTTGATTTTAAACGACAATGGAGGCTGGTGCAGACACACAGCAAAGTGGTGAAACAGTTGTCTCAGAGTCTGAGACCCAGCAGATCACCATTGGACAGGCGTCCATAGCAGCTGGCCAGGTGACATCCAGCGGTCCCACAGTCACCCTTGTGCAGTTACCCAACGGTCAGACAGTCCAAGTGCACGGGGTGATCCAAGCTGCTCAGCCCTCTGTCATCCAGTCCCCACAAGTCCAGACTGtacagATTTCGACTGTTGCTGAGAGCGAGGACTCTCAGGAGTCTGTAGACAGCGTGACAGATTgtcagaagaggagagagatcctGTCCAGACGTCCTTCTTACAGGAAGATTCTGAATGATTTATCGTCGGATGCTCCAGCAGTGCCTCGAATTGAGGAAGAAAAGTCTGAGGACGACACAGCCCCTGCCATCACCACAGTCACCATGCCCACTCCCATCTATCAGACTAGCAGTGGCCAGTACATTGCCATTACCCAGGGTGGGGCCATCCAGCTGGCCAATAATGGCACAGATGGAGTGCAGGGCCTGCAGACGCTGACCATGGCCAACGCCGGCCAGCAAGGTGCCACCATCCTGCAGTACGCCCAGACCAGCGACGGGCAGCAGATCCTAGTGCCCAGCAACCAAGTGGTTGTACAAGCCGCCTCAGGTGATGTCCAGGCCTATCAGATACGCACAGCCCCCACCAACGCCATCACTCCTGGGGTTGTCATGGCGACTTCGCCCGCGCTGGGCACAGGAGGCGGCACTGAGGAGGTCACACGCAAAAGGGAGGTCAGACTTATGAAAAACAGGGAGGCCGCCCGCGAGTGTCGCAGGAAGAAGAAGGAGTACGTCAAGTGTCTGGAGAACCGCGTGGCCGTGCTGGAGAACCAGAACAAAACCCTCATCGAGGAGCTCAAAGCCCTCAAAGACTTGTACTGCCACAAATCGGAGTAGAAAACGTCGCCAAAACCGCCTGCCAGGGGCTCGACAGGTGCCCGTCTGTCCCCATGTACAGAGACTCAGCACAGAGCCATGCATCTGGATAACACTCCCCACCCCTCCACCCCACCCCTTTTCTActcttttgctttcttttttaaaaactgcTGAGAAATCTTTAAAGTGACTCACCAGGATTAGAAAAACcaaccacccccacccccatcccCCTTCAGCGATCAGTCAGAGAAGCAATGTTCAGAGCAGACGCGTGGAGGAGACTCCAACTATACAGGGTCCTCGTGGTGAAGTGATGGAACGGACAATGAggctgttgtgttgtttttttttggacgccaccaaaaaaaaaaagggaagcatTCCAGTCACTGGTGCCTGGACAAACTAGGCAACGTCACCAGCAACGGGGGGGAACTGCTCACTTTAACCATCACCACCAACAAACGACAGAACTTTTTACGTCAGAACGTTTAATCTCCCCCAAGACACTCGGATCATTTGGAGAGGTTACTTTTGTGTGCAATGTTTGTAACCGTAACTGCGCTCTTTGCATTAACATCTGTTACTTAACTAATGCTTTGAACTGTAGATGGGCCGCGCCACGGACATTTTTATCTTTTAGCTGTGATTTGTTTCATGTATTGGATTATCTGCTTGCATAATgccaatgacttttttttttttactttgaattTACTTTGCCTTGATAtgacatgaacaaaaaaaaaaaacccgctAACCATTACGTAAGGTTGTAGATGGTTTCCGTGTTAAATGCAGCTCTGAAAGAGCGCGATGAAGAGAGACCGTAAGTCAAACCGTCTCTCGAGTGGAACTCTTTAAGTGTTTATTTGGTCTCTGATGCATGTCCCTTCCTTCCCAATCATATGACTAAGGCTCATTAACAAAAACATCCCCATAAAAAAGGAGCAGAATAGTTTAAACAGATTTAAACATGGTTTATGTGCTCACCGGAGGTCACGAGTAAACTGGCTCCGTGGATTATGGATTTTTCAatccatttttttgtatttgttatttgATTAATTCCTGGATTCTTCttgaataaaacagaaaaataa
>XM_039792845.1
GGATACGCATCCGAAGTTTGCTAAACAGATAGATGGCTGCCCAGAGAAGTTATTTGCGGCTAATATCCGCACAAAGCCAACAAAGAGATCATGGCGGCGGTGTTGCAGAGGCTCTTAAAATGAGTCAGTCTCTGCAAGGCTCGCAACACAACTGAGACATAGATTTTAAACGACAATGGAGGCTGGTGCAGACACACAGCAAAGTGGTGAAACAGTTGTCTCAGAGTCTGAGACCCAGCAGATCACCATTGGACAGGCGTCCATAGCAGCTGGCCAGGTGACATCCAGCGGTCCCACAGTCACCCTTGTGCAGTTACCCAACGGTCAGACAGTCCAAGTGCACGGGGTGATCCAAGCTGCTCAGCCCTCTGTCATCCAGTCCCCACAAGTCCAGACTGtacagATTTCGACTGTTGCTGAGAGCGAGGACTCTCAGGAGTCTGTAGACAGCGTGACAGATTgtcagaagaggagagagatcctGTCCAGACGTCCTTCTTACAGGAAGATTCTGAATGATTTATCGTCGGATGCTCCAGCAGTGCCTCGAATTGAGGAAGAAAAGTCTGAGGACGACACAGCCCCTGCCATCACCACAGTCACCATGCCCACTCCCATCTATCAGACTAGCAGTGGCCAGTACATTGCCATTACCCAGGGTGGGGCCATCCAGCTGGCCAATAATGGCACAGATGGAGTGCAGGGCCTGCAGACGCTGACCATGGCCAACGCCGGCCAGCAAGGTGCCACCATCCTGCAGTACGCCCAGACCAGCGACGGGCAGCAGATCCTAGTGCCCAGCAACCAAGTGGTTGTACAAGCCGCCTCAGGTGATGTCCAGGCCTATCAGATACGCACAGCCCCCACCAACGCCATCACTCCTGGGGTTGTCATGGCGACTTCGCCCGCGCTGGGCACAGGAGGCGGCACTGAGGAGGTCACACGCAAAAGGGAGGTCAGACTTATGAAAAACAGGGAGGCCGCCCGCGAGTGTCGCAGGAAGAAGAAGGAGTACGTCAAGTGTCTGGAGAACCGCGTGGCCGTGCTGGAGAACCAGAACAAAACCCTCATCGAGGAGCTCAAAGCCCTCAAAGACTTGTACTGCCACAAATCGGAGTAGAAAACGTCGCCAAAACCGCCTGCCAGGGGCTCGACAGGTGCCCGTCTGTCCCCATGTACAGAGACTCAGCACAGAGCCATGCATCTGGATAACACTCCCCACCCCTCCACCCCACCCCTTTTCTActcttttgctttcttttttaaaaactgcTGAGAAATCTTTAAAGTGACTCACCAGGATTAGAAAAACcaaccacccccacccccatcccCCTTCAGCGATCAGTCAGAGAAGCAATGTTCAGAGCAGACGCGTGGAGGAGACTCCAACTATACAGGGTCCTCGTGGTGAAGTGATGGAACGGACAATGAggctgttgtgttgtttttttttggacgccaccaaaaaaaaaaagggaagcatTCCAGTCACTGGTGCCTGGACAAACTAGGCAACGTCACCAGCAACGGGGGGGAACTGCTCACTTTAACCATCACCACCAACAAACGACAGAACTTTTTACGTCAGAACGTTTAATCTCCCCCAAGACACTCGGATCATTTGGAGAGGTTACTTTTGTGTGCAATGTTTGTAACCGTAACTGCGCTCTTTGCATTAACATCTGTTACTTAACTAATGCTTTGAACTGTAGATGGGCCGCGCCACGGACATTTTTATCTTTTAGCTGTGATTTGTTTCATGTATTGGATTATCTGCTTGCATAATgccaatgacttttttttttttactttgaattTACTTTGCCTTGATAtgacatgaacaaaaaaaaaaaacccgctAACCATTACGTAAGGTTGTAGATGGTTTCCGTGTTAAATGCAGCTCTGAAAGAGCGCGATGAAGAGAGACCGTAAGTCAAACCGTCTCTCGAGTGGAACTCTTTAAGTGTTTATTTGGTCTCTGATGCATGTCCCTTCCTTCCCAATCATATGACTAAGGCTCATTAACAAAAACATCCCCATAAAAAAGGAGCAGAATAGTTTAAACAGATTTAAACATGGTTTATGTGCTCACCGGAGGTCACGAGTAAACTGGCTCCGTGGATTATGGATTTTTCAatccatttttttgtatttgttatttgATTAATTCCTGGATTCTTCttgaataaaacagaaaaataa

Function

NR:

description
PREDICTED: cyclic AMP-responsive element-binding protein 1-like isoform X1

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG:

id description
K05870 CREB1; cyclic AMP-responsive element-binding protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792842.1 False 2220 mRNA 0.50 8 11718181 11724139
XM_039792843.1 True 2241 mRNA 0.49 8 11718181 11723992
XM_039792844.1 False 2186 mRNA 0.50 8 11718181 11724138
XM_039792845.1 False 2208 mRNA 0.49 8 11718181 11723992

Neighbor

gene id symbol gene type direction distance location
LOC120554155 ccnyl1,LOC103374641,LOC104957757,LOC101466371,LOC100696912 coding downstream 3031 11708327 ~ 11715150 (-)
tns1a NA coding downstream 33748 11567571 ~ 11684433 (-)
LOC120554150 NA coding downstream 215700 11470451 ~ 11502481 (-)
LOC120554162 ctdsp1,LOC104928328,LOC104957766,LOC103148703 coding downstream 330929 11370953 ~ 11387252 (-)
LOC120554143 LOC104935050 coding downstream 395095 11314682 ~ 11323086 (-)
LOC120554168 LOC104928316,LOC103357968,LOC104957755 coding upstream 115578 11839717 ~ 11849823 (-)
obsl1a obsl1,LOC102777652,LOC100691457 coding upstream 644257 12368396 ~ 12383014 (-)
LOC120554061 LOC101475634,LOC102213813,LOC107377203,LOC108242213,LOC106525271 coding upstream 878105 12602244 ~ 12644357 (-)
filip1l filip1l,LOC100693076,LOC102798342,LOC102213048 coding upstream 1073705 12797844 ~ 12885098 (-)
LOC120554312 NA coding upstream 1227282 12951421 ~ 12954215 (-)
G234181 NA non-coding downstream 33014 11684622 ~ 11685167 (-)
LOC120554169 NA non-coding downstream 96828 11620869 ~ 11621353 (-)
LOC120554171 NA non-coding downstream 97325 11619834 ~ 11620856 (-)
G234153 NA non-coding downstream 372305 11343961 ~ 11345876 (-)
G234152 NA non-coding downstream 376342 11336610 ~ 11341839 (-)
G234194 NA non-coding upstream 74424 11798563 ~ 11822502 (-)
G234225 NA non-coding upstream 398101 12122240 ~ 12201428 (-)
G234238 myl1,LOC101075868,LOC104929359 non-coding upstream 475937 12200076 ~ 12270069 (-)
G234240 NA non-coding upstream 486795 12210934 ~ 12212609 (-)
G234311 NA non-coding upstream 634624 12358763 ~ 12361269 (-)
igfbp5a igfbp5,LOC103371819,LOC104928322,LOC101465019 other downstream 179860 11524382 ~ 11538321 (-)
LOC120554153 LOC101072154,LOC104957764,LOC103371815,LOC107377212,LOC108242182 other downstream 228704 11458937 ~ 11489477 (-)
spega LOC103358966 other downstream 276255 11388552 ~ 11441926 (-)
LOC120554131 NA other downstream 578936 11136627 ~ 11139245 (-)
LOC120554127 NA other downstream 671222 11037355 ~ 11046959 (-)
G234253 LOC103139183,LOC106940425,LOC106914874 other upstream 554380 12278519 ~ 12293143 (-)
G234405 NA other upstream 1228951 12953090 ~ 12954125 (-)
arhgap1 arhgap1,LOC101474800,LOC102196105 other upstream 2470173 14194312 ~ 14290043 (-)
G234898 NA other upstream 3123695 14847834 ~ 14849737 (-)
LOC120554377 LOC103355861 other upstream 3242177 14966316 ~ 15013814 (-)

Expression


Co-expression Network