LOC120554168 (LOC104928316,LOC103357968,LOC104957755)


Basic Information

Item Value
gene id LOC120554168
gene name LOC104928316,LOC103357968,LOC104957755
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 11839717 ~ 11849823 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792858.1
TTCTATGATTAGGGCTGCGGCGAGGGAAGGAGGCTGCCACTCGGAAAGGGCAAAGGCGCAGTTGGCGCCTTCTTGTTGACCGCGCACCACGAGCTGCGGTTCATTTATCTGTACCGTTGTGGTGTGGATCCCGAATCAGTGGCTTTGTGGCTAAAATACTTGAGGGAGAATGAGAGTCGCGACCTCCAGGGTGTGAGCAGAGTGCGCAAAACGTCTTGGAGTACGGCATGGCTCTGGAGAGCGCGTCGCTCCTGAAAGCGGGGCTTGTGTTGTTGATGGCAGCTCAAGTCCTTCCATCAGCGTCCAGCTGCAACAGGGGTTTCTACGAGAGGATGATCAATGATCTCTGCTTAGCGAAGTTCAAATTCGACATGGGGGCGCTGGACCAGGGCCTGTGGTGCAGCTGGCCGGACACCATGGAGATCTACGAGGGGCTAACAAACTGCACCTTCCAGGTGGCCTTGAGGGTGGACTGCTTCTGGCCAAATCAGATAGTTGACCGCTTCTTCACGCAGGTTCACCGGATCTACTTCCACGACTGCGCTCTGACCGGCCGGCTCATCCACGACCCGCCGACCAGCATCCTCGCCCCGTTTATCGCAGTGCCAGTGCTGGTCACCCTGCTCATGACTGCCCTTGTGGTGTGGAGGAGTAAACGCACAGAAGGGGTTTTATAAGGACTGGCTTCTGGATTGGGGCACAAGGCTTGTAAATACAAATGGACTCCCGAGGGCCAATGACGGAGCATGGGAAAAAAAggttattttataaaatattaagtTGATGCACTTATACTCCTTGTCTTTCAATTGTGCTATTCCCATATTAGTATGCATATTATTGTATAGACCATTGCATGTCTCATGAAAAACTGTAGCAGACTTTAAAACAGTAGTATGTGTaataaaaaactgtttttgctATAAATGTGATTGAAATTGA

Function

NR:

description
PREDICTED: receptor activity-modifying protein 1

GO: NA

KEGG:

id description
K08447 RAMP1; receptor activity modifying protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792858.1 True 942 mRNA 0.51 3 11839717 11849823

Neighbor

gene id symbol gene type direction distance location
LOC120554156 LOC104957759,LOC101074451,LOC100697446,LOC103389560 coding downstream 115578 11718181 ~ 11724139 (-)
LOC120554155 ccnyl1,LOC103374641,LOC104957757,LOC101466371,LOC100696912 coding downstream 124567 11708327 ~ 11715150 (-)
tns1a NA coding downstream 155284 11567571 ~ 11684433 (-)
LOC120554150 NA coding downstream 337236 11470451 ~ 11502481 (-)
LOC120554162 ctdsp1,LOC104928328,LOC104957766,LOC103148703 coding downstream 452465 11370953 ~ 11387252 (-)
obsl1a obsl1,LOC102777652,LOC100691457 coding upstream 518573 12368396 ~ 12383014 (-)
LOC120554061 LOC101475634,LOC102213813,LOC107377203,LOC108242213,LOC106525271 coding upstream 752421 12602244 ~ 12644357 (-)
filip1l filip1l,LOC100693076,LOC102798342,LOC102213048 coding upstream 948021 12797844 ~ 12885098 (-)
LOC120554312 NA coding upstream 1101598 12951421 ~ 12954215 (-)
LOC120554795 NA coding upstream 1104283 12954106 ~ 12959563 (-)
G234194 NA non-coding downstream 17215 11798563 ~ 11822502 (-)
G234181 NA non-coding downstream 154550 11684622 ~ 11685167 (-)
LOC120554169 NA non-coding downstream 218364 11620869 ~ 11621353 (-)
LOC120554171 NA non-coding downstream 218861 11619834 ~ 11620856 (-)
G234153 NA non-coding downstream 493841 11343961 ~ 11345876 (-)
G234225 NA non-coding upstream 272417 12122240 ~ 12201428 (-)
G234238 myl1,LOC101075868,LOC104929359 non-coding upstream 350253 12200076 ~ 12270069 (-)
G234240 NA non-coding upstream 361111 12210934 ~ 12212609 (-)
G234311 NA non-coding upstream 508940 12358763 ~ 12361269 (-)
LOC120554060 NA non-coding upstream 553166 12402989 ~ 12424938 (-)
igfbp5a igfbp5,LOC103371819,LOC104928322,LOC101465019 other downstream 301396 11524382 ~ 11538321 (-)
LOC120554153 LOC101072154,LOC104957764,LOC103371815,LOC107377212,LOC108242182 other downstream 350240 11458937 ~ 11489477 (-)
spega LOC103358966 other downstream 397791 11388552 ~ 11441926 (-)
LOC120554131 NA other downstream 700472 11136627 ~ 11139245 (-)
LOC120554127 NA other downstream 792758 11037355 ~ 11046959 (-)
G234253 LOC103139183,LOC106940425,LOC106914874 other upstream 428696 12278519 ~ 12293143 (-)
G234405 NA other upstream 1103267 12953090 ~ 12954125 (-)
arhgap1 arhgap1,LOC101474800,LOC102196105 other upstream 2344489 14194312 ~ 14290043 (-)
G234898 NA other upstream 2998011 14847834 ~ 14849737 (-)
LOC120554377 LOC103355861 other upstream 3116493 14966316 ~ 15013814 (-)

Expression


Co-expression Network