LOC120554169


Basic Information

Item Value
gene id LOC120554169
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 11620869 ~ 11621353 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005638325.1
GGCATACCCAACTTTGAATCCAAAGGAGGCTGCCGTCCTTTCCTGAAGATCTACCAGGCCATGCAACCAGTCTATACGTCGGGAATATAcAATGTCCAAGGAGACAGCAACACCAGTATCTGCATCACCATTGAACCCGGCCTGCTTCTAAAGGGAGACATcctgTTGAAGTGTTACCACAAGAGGTTCAGAAACCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005638325.1 True 199 lncRNA 0.50 4 11620869 11621353

Neighbor

gene id symbol gene type direction distance location
LOC120554150 NA coding downstream 118388 11470451 ~ 11502481 (-)
LOC120554162 ctdsp1,LOC104928328,LOC104957766,LOC103148703 coding downstream 233617 11370953 ~ 11387252 (-)
LOC120554143 LOC104935050 coding downstream 297783 11314682 ~ 11323086 (-)
LOC120554144 NA coding downstream 306725 11306761 ~ 11314144 (-)
arpc2 arpc2 coding downstream 345887 11265556 ~ 11274982 (-)
LOC120554155 ccnyl1,LOC103374641,LOC104957757,LOC101466371,LOC100696912 coding upstream 86974 11708327 ~ 11715150 (-)
LOC120554156 LOC104957759,LOC101074451,LOC100697446,LOC103389560 coding upstream 96828 11718181 ~ 11724139 (-)
LOC120554168 LOC104928316,LOC103357968,LOC104957755 coding upstream 218364 11839717 ~ 11849823 (-)
obsl1a obsl1,LOC102777652,LOC100691457 coding upstream 747043 12368396 ~ 12383014 (-)
LOC120554061 LOC101475634,LOC102213813,LOC107377203,LOC108242213,LOC106525271 coding upstream 980891 12602244 ~ 12644357 (-)
LOC120554171 NA non-coding downstream 13 11619834 ~ 11620856 (-)
G234153 NA non-coding downstream 274993 11343961 ~ 11345876 (-)
G234152 NA non-coding downstream 279030 11336610 ~ 11341839 (-)
G234080 NA non-coding downstream 286780 11333367 ~ 11334089 (-)
G234078 NA non-coding downstream 288309 11332281 ~ 11332560 (-)
G234181 NA non-coding upstream 63269 11684622 ~ 11685167 (-)
G234194 NA non-coding upstream 177210 11798563 ~ 11822502 (-)
G234225 NA non-coding upstream 500887 12122240 ~ 12201428 (-)
G234238 myl1,LOC101075868,LOC104929359 non-coding upstream 578723 12200076 ~ 12270069 (-)
G234240 NA non-coding upstream 589581 12210934 ~ 12212609 (-)
igfbp5a igfbp5,LOC103371819,LOC104928322,LOC101465019 other downstream 82548 11524382 ~ 11538321 (-)
LOC120554153 LOC101072154,LOC104957764,LOC103371815,LOC107377212,LOC108242182 other downstream 131392 11458937 ~ 11489477 (-)
spega LOC103358966 other downstream 178943 11388552 ~ 11441926 (-)
LOC120554131 NA other downstream 481624 11136627 ~ 11139245 (-)
LOC120554127 NA other downstream 573910 11037355 ~ 11046959 (-)
G234253 LOC103139183,LOC106940425,LOC106914874 other upstream 657166 12278519 ~ 12293143 (-)
G234405 NA other upstream 1331737 12953090 ~ 12954125 (-)
arhgap1 arhgap1,LOC101474800,LOC102196105 other upstream 2572959 14194312 ~ 14290043 (-)
G234898 NA other upstream 3226481 14847834 ~ 14849737 (-)
LOC120554377 LOC103355861 other upstream 3344963 14966316 ~ 15013814 (-)

Expression


Co-expression Network