G46066 (ppdpf,LOC106937393,LOC103148182,LOC103356003)


Basic Information

Item Value
gene id G46066
gene name ppdpf,LOC106937393,LOC103148182,LOC103356003
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 793902 ~ 900296 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU61671
gagagagagagggagagagagagagagaagatgagagagagagagagagagagagagagagagaatatagtCTTGATCCTGTATAATGGAAGGTTGGGTCTGTACGTCACACTGGAAGGATTGATGAATTTGCACAGGGACTGTCATCCTCTCGGACGCACAATtccacagaataaaaaaataaataaatactctgaatgttaacacatctccactCCATAAAGGAAAACAGTCCACTACATTTCACAGATTGTTATTCTGGACTCGTGTGAGTAAGAGACTAGAGGAGCAGAATTCAATCTGTTGGAGGGACAAGCAGCTGGGTTAATGGTTTTAGACACGGTTAGGATTATGACCAGGATTAAATAAGACTACGATGCAGAGGCAGTATTATGGGATGTGGGCGTGTTTATACTCACTTCTGCTGTGCCTCCTCAGTCAGTGGGGTCATCCCTGGCTGCTTCCCAAAGAAGAAACTGGACCACCAATGGCCAGAGTCCTGCTTGGGGAGTCctggatGGTGAGGGATGACTTCTCCACTGTACTCCGAACTGCCGCAAGAGCTGCTGCTGGACGTAGAGCCGATGCGCCtcCGGTAGTAGTCAGTGGTCGCCACCAGAGAGCCGCCTGCTGGAATAGCTGCCATTCTACTGGAGTTGGTCGCTGTACGCTGTGCTTGATGGAACCTTGTTAGGGACCCAGATGTGCTGATGTTCAGTAGCACCCAATTCAACTCAGTCAGTCGGCGAGGCTGGGGGAGGAAAGGCTAGGCGACGGGACCCATTTGAAAACAAGTTTTGGGTAAATGTAACCCTCCAAGGTCCGTAAGGGATAGATCAGCGGAACTTCTTGCTGCTGTCAACGCTCGGCTCGCGCTTTTATACAAAGACAGTGGGACGGTGACGTAGACATCAGCCAGGGGGCGGGGCCACCGGACACTGCTGCCGGTTCATACCGGTTCATACCTCCTTATACCATAGACTGTACAGTCTATGctttatacaaa

Function

symbol description
ppdpf Predicted to be involved in cell differentiation.

NR:

description
PREDICTED: pancreatic progenitor cell differentiation and proliferation factor B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU61671 True 1006 TUCP 0.50 5 793902 900296

Neighbor

gene id symbol gene type direction distance location
LOC120558328 nol4l,LOC103385166,LOC103361530 coding upstream 22846 558217 ~ 771056 (+)
commd7 commd7,LOC102794680 coding upstream 308007 476464 ~ 485895 (+)
vps13d vps13d coding upstream 584165 74750 ~ 209737 (+)
LOC120558443 LOC104919493 coding upstream 727847 63849 ~ 66055 (+)
LOC120558777 LOC102225534,LOC103148188,LOC103148186,LOC103356007,LOC103385155 coding downstream 38680 938976 ~ 986271 (+)
trim101 NA coding downstream 83873 984169 ~ 1010837 (+)
LOC120558589 LOC103356004 coding downstream 115092 1015388 ~ 1045239 (+)
adrm1 NA coding downstream 148676 1048972 ~ 1053010 (+)
LOC120558473 LOC103372586 coding downstream 667999 1568295 ~ 1608445 (+)
G46042 NA non-coding upstream 292343 501349 ~ 501559 (+)
LOC120559841 NA non-coding upstream 417429 375096 ~ 376473 (+)
G46014 mapre1 non-coding upstream 428635 358822 ~ 365267 (+)
G46013 mapre1 non-coding upstream 453224 332243 ~ 340678 (+)
G46011 NA non-coding upstream 463494 323243 ~ 330408 (+)
G46132 NA non-coding downstream 2143 902439 ~ 902678 (+)
G46133 NA non-coding downstream 2520 902816 ~ 903470 (+)
G46134 LOC104947167 non-coding downstream 3262 903558 ~ 907128 (+)
G46154 NA non-coding downstream 17796 918092 ~ 918334 (+)
G46156 NA non-coding downstream 19948 920244 ~ 961803 (+)
LOC120559832 rps21 other downstream 336019 1236315 ~ 1247771 (+)
G46238 NA other downstream 376992 1277288 ~ 1284379 (+)
G46305 NA other downstream 622389 1522685 ~ 1523231 (+)
G46328 NA other downstream 735652 1635948 ~ 1638170 (+)
LOC120559409 NA other downstream 1305045 2205341 ~ 2232659 (+)

Expression


Co-expression Network