G46154


Basic Information

Item Value
gene id G46154
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 918092 ~ 918334 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU61772
ggcagaatgccccgacacttaaattcaactaacatgtaggctaacagtgaacaatcagtgttggacctccagtctgttgagatgcctctccaaacgcagaaaccaagcgcaatcgcaccataaaacgttaagacacgttaagaaaaaagatcagtattttgccgtaatccaatgacatgaaaacaagtcatccacagcgatcagtagagCCACAAACAGAGTCccggtgtatccagcaaggcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU61772 True 243 lncRNA 0.45 1 918092 918334

Neighbor

gene id symbol gene type direction distance location
ptk6b NA coding upstream 70470 825255 ~ 847622 (+)
zgc:194282 srms,LOC103385165 coding upstream 96912 782791 ~ 821180 (+)
LOC120558328 nol4l,LOC103385166,LOC103361530 coding upstream 147036 558217 ~ 771056 (+)
commd7 commd7,LOC102794680 coding upstream 432197 476464 ~ 485895 (+)
vps13d vps13d coding upstream 708355 74750 ~ 209737 (+)
LOC120558777 LOC102225534,LOC103148188,LOC103148186,LOC103356007,LOC103385155 coding downstream 20642 938976 ~ 986271 (+)
trim101 NA coding downstream 65835 984169 ~ 1010837 (+)
LOC120558589 LOC103356004 coding downstream 97054 1015388 ~ 1045239 (+)
adrm1 NA coding downstream 130638 1048972 ~ 1053010 (+)
LOC120558473 LOC103372586 coding downstream 649961 1568295 ~ 1608445 (+)
G46134 LOC104947167 non-coding upstream 10964 903558 ~ 907128 (+)
G46133 NA non-coding upstream 14622 902816 ~ 903470 (+)
G46132 NA non-coding upstream 15414 902439 ~ 902678 (+)
G46078 NA non-coding upstream 46853 862191 ~ 871239 (+)
G46042 NA non-coding upstream 416533 501349 ~ 501559 (+)
G46156 NA non-coding downstream 1910 920244 ~ 961803 (+)
G46160 NA non-coding downstream 77040 995374 ~ 1054320 (+)
G46227 NA non-coding downstream 280676 1199010 ~ 1199211 (+)
G46249 NA non-coding downstream 398266 1316600 ~ 1317598 (+)
G46252 NA non-coding downstream 416142 1334476 ~ 1334791 (+)
G46066 ppdpf,LOC106937393,LOC103148182,LOC103356003 other upstream 17796 793902 ~ 900296 (+)
LOC120559832 rps21 other downstream 317981 1236315 ~ 1247771 (+)
G46238 NA other downstream 358954 1277288 ~ 1284379 (+)
G46305 NA other downstream 604351 1522685 ~ 1523231 (+)
G46328 NA other downstream 717614 1635948 ~ 1638170 (+)
LOC120559409 NA other downstream 1287007 2205341 ~ 2232659 (+)

Expression


Co-expression Network