Gene
RNA
| Item | Value |
|---|---|
| gene id | G46252 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053116.1 |
| NCBI id | CM020913.1 |
| chromosome length | 44101041 |
| location | 1334476 ~ 1334791 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| id | name | namespace |
|---|---|---|
| GO:0004112 | cyclic-nucleotide phosphodiesterase activity | molecular_function |
| GO:0004114 | 3',5'-cyclic-nucleotide phosphodiesterase activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU61923 | True | 316 | lncRNA | 0.47 | 1 | 1334476 | 1334791 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| adrm1 | NA | coding | upstream | 281466 | 1048972 ~ 1053010 (+) |
| LOC120558589 | LOC103356004 | coding | upstream | 289237 | 1015388 ~ 1045239 (+) |
| trim101 | NA | coding | upstream | 323639 | 984169 ~ 1010837 (+) |
| LOC120558777 | LOC102225534,LOC103148188,LOC103148186,LOC103356007,LOC103385155 | coding | upstream | 348205 | 938976 ~ 986271 (+) |
| ptk6b | NA | coding | upstream | 486854 | 825255 ~ 847622 (+) |
| LOC120558473 | LOC103372586 | coding | downstream | 233504 | 1568295 ~ 1608445 (+) |
| LOC120559387 | NA | coding | downstream | 1078780 | 2413571 ~ 2420858 (+) |
| LOC120558519 | NA | coding | downstream | 1214148 | 2548939 ~ 2550724 (+) |
| LOC120558523 | NA | coding | downstream | 1311101 | 2645892 ~ 2647467 (+) |
| LOC120559413 | NA | coding | downstream | 1326781 | 2661572 ~ 2662342 (+) |
| G46249 | NA | non-coding | upstream | 16878 | 1316600 ~ 1317598 (+) |
| G46227 | NA | non-coding | upstream | 135265 | 1199010 ~ 1199211 (+) |
| G46160 | NA | non-coding | upstream | 280156 | 995374 ~ 1054320 (+) |
| G46156 | NA | non-coding | upstream | 372673 | 920244 ~ 961803 (+) |
| G46154 | NA | non-coding | upstream | 416142 | 918092 ~ 918334 (+) |
| LOC120558411 | NA | non-coding | downstream | 16939 | 1351730 ~ 1352130 (+) |
| G46258 | NA | non-coding | downstream | 30329 | 1365120 ~ 1367303 (+) |
| G46259 | NA | non-coding | downstream | 32846 | 1367637 ~ 1368791 (+) |
| G46273 | NA | non-coding | downstream | 137122 | 1471913 ~ 1472145 (+) |
| G46274 | NA | non-coding | downstream | 137365 | 1472156 ~ 1472382 (+) |
| G46238 | NA | other | upstream | 50097 | 1277288 ~ 1284379 (+) |
| LOC120559832 | rps21 | other | upstream | 86705 | 1236315 ~ 1247771 (+) |
| G46066 | ppdpf,LOC106937393,LOC103148182,LOC103356003 | other | upstream | 434180 | 793902 ~ 900296 (+) |
| G46305 | NA | other | downstream | 187894 | 1522685 ~ 1523231 (+) |
| G46328 | NA | other | downstream | 301157 | 1635948 ~ 1638170 (+) |
| LOC120559409 | NA | other | downstream | 870550 | 2205341 ~ 2232659 (+) |
| LOC120558501 | NA | other | downstream | 1002545 | 2337336 ~ 2339429 (+) |
| G46530 | NA | other | downstream | 1055155 | 2389946 ~ 2390512 (+) |
