G46258


Basic Information

Item Value
gene id G46258
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 1365120 ~ 1367303 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU61933
tctctttatttatttaaacagggacaatgtacaatatacattaacctTAGACAGGACAGATGCATTataccaggttgtagcacaTGTGCtagtttccacctgtagtccctgggcaggctgATGTcaacaaataaatgtaataatacatttatcccaaaaccaacattaaaatgatCACACCCTTCATTCATTCCTCAGCATTCATTTACAAATACGCTCCCAAATACACATCAATTTCTATACATTATGTGAACATGAACATGGCCCGATATGAAAAAATTTTATCAGCTCTGTTGGCAACTTATTCCCCTGTCTGATAGCCACACTTGAGAAAGCTGAGCTGCCGAAAGCTCTTTACACTGAGGAATCCTACACTCGCCCCGAACAGTCGACCGAAGTGCTTTTTAAGAATGTGACAGTGATGAAATAGCCGAGATTTCTTGTCATGAACCTTAAGAGAACTTTTGTACAATGATTCCAGGGGCCTAAATGCTGTTTTACATGCCTGTGACCAACTTGTCATGCAATAACGAAAGTGCGGAATAATCATCGCATTGAGATATAAATTAGATGCATCTATGGTCAAAGAGTTCCTAATATATCTAAAATGTGCTATGTTAATTTTCAACGTGTTGGctatctttttaatgttttttgaaatttaaatttgGGTCAAGAATGATATCTGCCTTGAGTTAAATGCTTCAaacataacacttgacatattgttttatcatacagctgacatatacttacaataaaacacataaacaaagtgatatgcagccagactgaagcacattgtcagccacaatctattgctcatctttcacaaacagtgaaaaGACCTACACACAATCATATATGCATTATATCATGAAGTTATTCCACAACCAGCTttaagcaacattatttaaagttttaattgaggtaggtccaaattaggcctatagtttagaaatatttagtttacattagGGTGCCAGCAGAGGATAAGagctacttggcatggagaataaagatcagaccatattctctgtgcttgtctggagagactggtttctattcctctccaTAACCTTCATAACAGTCACCTGACAACCAAACTTTATatgagatgtttttagatattgTCATGCTTTCTGACATGAATATGTTCtataatgcagccttgtataacataaaccctATGATTCActgtgtctgctctaaatgataacacccactttcaacacgggccttccagccaaaggtgttgtccatatgaacaccaagGTGCCTTTAGAGCAGAGCCGAtggattggttcatcatttatgacctctgataccctctgacccatgtcacaACCAACTCCtcagtttgtgaaaaaaatgacaaaacacatgttgtatatgtacacatacccaaacaaagctatatacatctctGTGAAAAAAAACCTCAGCAACAATCTGCTTATCTTTTTGATTTCCtgaaatgcttcctaaaactagtcccttcttCATTTTGATGGCTAtatggctacaagctgtaaccacggtgattgatatgaggatcatcttctgaatataataattaatatgttaggcctaccataaattgatatttcaaaaaagtcagttatttgctcattttgtttctctgttctgCGCACCATCCAATATTGCCAGGTTTATATTGTGGAAtctgttctgtatgtctgaataataaatggtgctaataaaaaattgaacttaaaaaaaaagtaatttatttaaaacaactaataatgcagtgtgatgttaaatcaaactaagtcccacacatacatatgctcatgttttttccctttttcccatcaactgcaaaattagaaaattgcatttttaaaggggtgatagaatgattatatagggtattttacactgttccttaaggtctcctaatggggtatgtaacattggttgggctgaaaattgcccgaatgatattttattaggcacttaactaccctgtgaatatggctctatttggaacaagagcttttcttccaaatatggtatgctcattaatattcagaatgagctacgcgctgattggtttgagcaaactacatagaaacacatgggagactcatatttcagacactgcaaagttatacattgtttatcgggctatttcgttattaaaatCACTTCTGAatc

Function

GO: NA

KEGG:

id description
ko00350 Tyrosine metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
TU61933 True 2184 lncRNA 0.36 1 1365120 1367303

Neighbor

gene id symbol gene type direction distance location
adrm1 NA coding upstream 312110 1048972 ~ 1053010 (+)
LOC120558589 LOC103356004 coding upstream 319881 1015388 ~ 1045239 (+)
trim101 NA coding upstream 354283 984169 ~ 1010837 (+)
LOC120558777 LOC102225534,LOC103148188,LOC103148186,LOC103356007,LOC103385155 coding upstream 378849 938976 ~ 986271 (+)
ptk6b NA coding upstream 517498 825255 ~ 847622 (+)
LOC120558473 LOC103372586 coding downstream 200992 1568295 ~ 1608445 (+)
LOC120559387 NA coding downstream 1046268 2413571 ~ 2420858 (+)
LOC120558519 NA coding downstream 1181636 2548939 ~ 2550724 (+)
LOC120558523 NA coding downstream 1278589 2645892 ~ 2647467 (+)
LOC120559413 NA coding downstream 1294269 2661572 ~ 2662342 (+)
LOC120558411 NA non-coding upstream 12990 1351730 ~ 1352130 (+)
G46252 NA non-coding upstream 30329 1334476 ~ 1334791 (+)
G46249 NA non-coding upstream 47522 1316600 ~ 1317598 (+)
G46227 NA non-coding upstream 165909 1199010 ~ 1199211 (+)
G46160 NA non-coding upstream 310800 995374 ~ 1054320 (+)
G46259 NA non-coding downstream 334 1367637 ~ 1368791 (+)
G46273 NA non-coding downstream 104610 1471913 ~ 1472145 (+)
G46274 NA non-coding downstream 104853 1472156 ~ 1472382 (+)
LOC120559430 NA non-coding downstream 132201 1499504 ~ 1521327 (+)
LOC120559421 samd3,LOC101476819 non-coding downstream 182867 1550170 ~ 1551968 (+)
G46238 NA other upstream 80741 1277288 ~ 1284379 (+)
LOC120559832 rps21 other upstream 117349 1236315 ~ 1247771 (+)
G46066 ppdpf,LOC106937393,LOC103148182,LOC103356003 other upstream 464824 793902 ~ 900296 (+)
G46305 NA other downstream 155382 1522685 ~ 1523231 (+)
G46328 NA other downstream 268645 1635948 ~ 1638170 (+)
LOC120559409 NA other downstream 838038 2205341 ~ 2232659 (+)
LOC120558501 NA other downstream 970033 2337336 ~ 2339429 (+)
G46530 NA other downstream 1022643 2389946 ~ 2390512 (+)

Expression


Co-expression Network