G46339


Basic Information

Item Value
gene id G46339
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 1678337 ~ 1678602 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU62057
ATCCATGTATCacactgtttaacatccaaaactCATTATTGCTTCATCCATCACTGAtcataacatccaaaacaacacatcaacatgTCCTTCAACTGAAGACCATTACATCACAAACTTCGAACTGACAGAACACAACCATTACACAGCCTGGTTCCCCCAAGTTAGTTTACAGTCTACATATCCATGCCAGTACCATATGTAGggccctcctccatctcctgctggtgtcttttcacttttttggcTGTGCTTACACTTTTACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU62057 True 266 lncRNA 0.41 1 1678337 1678602

Neighbor

gene id symbol gene type direction distance location
LOC120558473 LOC103372586 coding upstream 69892 1568295 ~ 1608445 (+)
adrm1 NA coding upstream 625327 1048972 ~ 1053010 (+)
LOC120558589 LOC103356004 coding upstream 633098 1015388 ~ 1045239 (+)
trim101 NA coding upstream 667500 984169 ~ 1010837 (+)
LOC120558777 LOC102225534,LOC103148188,LOC103148186,LOC103356007,LOC103385155 coding upstream 692066 938976 ~ 986271 (+)
LOC120559387 NA coding downstream 734969 2413571 ~ 2420858 (+)
LOC120558519 NA coding downstream 870337 2548939 ~ 2550724 (+)
LOC120558523 NA coding downstream 967290 2645892 ~ 2647467 (+)
LOC120559413 NA coding downstream 982970 2661572 ~ 2662342 (+)
LOC120558526 NA coding downstream 1074911 2753513 ~ 2757047 (+)
G46329 NA non-coding upstream 19412 1638395 ~ 1658925 (+)
G46325 NA non-coding upstream 48000 1629532 ~ 1630337 (+)
LOC120559421 samd3,LOC101476819 non-coding upstream 126369 1550170 ~ 1551968 (+)
LOC120559430 NA non-coding upstream 157010 1499504 ~ 1521327 (+)
G46274 NA non-coding upstream 205955 1472156 ~ 1472382 (+)
G46340 NA non-coding downstream 9485 1688087 ~ 1688318 (+)
LOC120559418 NA non-coding downstream 17640 1696242 ~ 1697615 (+)
LOC120559419 NA non-coding downstream 19011 1697613 ~ 1698290 (+)
G46352 NA non-coding downstream 57723 1736325 ~ 1738245 (+)
G46378 NA non-coding downstream 121314 1799916 ~ 1818908 (+)
G46328 NA other upstream 40167 1635948 ~ 1638170 (+)
G46305 NA other upstream 155106 1522685 ~ 1523231 (+)
G46238 NA other upstream 393958 1277288 ~ 1284379 (+)
LOC120559832 rps21 other upstream 430566 1236315 ~ 1247771 (+)
G46066 ppdpf,LOC106937393,LOC103148182,LOC103356003 other upstream 778041 793902 ~ 900296 (+)
LOC120559409 NA other downstream 526739 2205341 ~ 2232659 (+)
LOC120558501 NA other downstream 658734 2337336 ~ 2339429 (+)
G46530 NA other downstream 711344 2389946 ~ 2390512 (+)
G46574 NA other downstream 1067296 2745898 ~ 2770453 (+)
LOC120559392 NA other downstream 1467879 3146481 ~ 3288089 (+)

Expression


Co-expression Network