G46488


Basic Information

Item Value
gene id G46488
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 2255337 ~ 2255857 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU62256
aaatttaagagaaaagattttcaaatattgtacctgtcatacagaacgaaatattctgtacatattttgcagtcagtactgccgacgttgtcttgctttaatcaaatcagtaggttatatatttatgttaacAACTCTCTCCCCGTACGTCAAACAAGGGTGATCCAAATCACgtgactttttttatgttgaaacCGGACACTTTCAAGTCTCCACTTTGAGTTTGCAACGATGGACGACGGCTGGTTAATTGAAGAGGTGGAGAAACACCGACAACTGTACGATACACAGGATCCTTGTTATAAAGATCCACGAAAAAAGGAGAAGGCATGGGACGCAGTTGCCACAGCTATTGGTTATGATGGTAGGTAAGTTTGAGGGAGCAGGGTGTAGAAAAAATGTTCATAGCCTATAGACTACTAACCTTTTCATCCCTCCTTTATTGGTCAACCAGCACACACTTTATTGCTGTCTCCTGCTTGCATTTCATAAATTCAGAAATACATTCACCACGTAATTAA

Function

GO: NA

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05133 Pertussis
ko05150 Staphylococcus aureus infection
ko05322 Systemic lupus erythematosus

RNA

RNA id representative length rna type GC content exon number start site end site
TU62256 True 521 lncRNA 0.39 1 2255337 2255857

Neighbor

gene id symbol gene type direction distance location
LOC120558473 LOC103372586 coding upstream 646892 1568295 ~ 1608445 (+)
adrm1 NA coding upstream 1202327 1048972 ~ 1053010 (+)
LOC120558589 LOC103356004 coding upstream 1210098 1015388 ~ 1045239 (+)
trim101 NA coding upstream 1244500 984169 ~ 1010837 (+)
LOC120558777 LOC102225534,LOC103148188,LOC103148186,LOC103356007,LOC103385155 coding upstream 1269066 938976 ~ 986271 (+)
LOC120559387 NA coding downstream 157714 2413571 ~ 2420858 (+)
LOC120558519 NA coding downstream 293082 2548939 ~ 2550724 (+)
LOC120558523 NA coding downstream 390035 2645892 ~ 2647467 (+)
LOC120559413 NA coding downstream 405715 2661572 ~ 2662342 (+)
LOC120558526 NA coding downstream 497656 2753513 ~ 2757047 (+)
G46485 NA non-coding upstream 1596 2253086 ~ 2253741 (+)
LOC120559434 NA non-coding upstream 223264 2030045 ~ 2032073 (+)
LOC120559429 NA non-coding upstream 351959 1902564 ~ 1903378 (+)
G46383 NA non-coding upstream 378355 1876712 ~ 1876982 (+)
LOC120559438 NA non-coding upstream 404139 1849055 ~ 1851198 (+)
G46490 NA non-coding downstream 5934 2261791 ~ 2262110 (+)
G46492 NA non-coding downstream 20408 2276265 ~ 2276586 (+)
LOC120559436 NA non-coding downstream 26267 2282124 ~ 2288627 (+)
G46501 NA non-coding downstream 46089 2301946 ~ 2302218 (+)
G46511 NA non-coding downstream 65480 2321337 ~ 2322029 (+)
LOC120559409 NA other upstream 22678 2205341 ~ 2232659 (+)
G46328 NA other upstream 617167 1635948 ~ 1638170 (+)
G46305 NA other upstream 732106 1522685 ~ 1523231 (+)
G46238 NA other upstream 970958 1277288 ~ 1284379 (+)
LOC120559832 rps21 other upstream 1007566 1236315 ~ 1247771 (+)
LOC120558501 NA other downstream 81479 2337336 ~ 2339429 (+)
G46530 NA other downstream 134089 2389946 ~ 2390512 (+)
G46574 NA other downstream 490041 2745898 ~ 2770453 (+)
LOC120559392 NA other downstream 890624 3146481 ~ 3288089 (+)
LOC120559414 NA other downstream 1023504 3279361 ~ 3304637 (+)

Expression


Co-expression Network