G46492



Basic Information


Item Value
gene id G46492
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 2276265 ~ 2276586 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU62262
ttttgcttagatagaagtggagaaggccgatgattgtttacgacagtgagaactacgtaggtttctgtctcctgagataaactgttgtttaggctaatgttaggaacagagagcaaagaggaaggtgagacaatggggtgactgtaatgatgtcctctttaactatggccaggctaaaagataaagttagaggggtggcttaacggactatcttcactatatgatgtttggatgtttagactttaggttagaaagacattttcagttgtgctgcgtgtaccttttgaaactgtgttttctccatttgcaaatgtaaataaat

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU62262 True 322 lncRNA 0.39 1 2276265 2276586

Neighbor


gene id symbol gene type direction distance location
LOC120558473 LOC103372586 coding upstream 667820 1568295 ~ 1608445 (+)
adrm1 NA coding upstream 1223255 1048972 ~ 1053010 (+)
LOC120558589 LOC103356004 coding upstream 1231026 1015388 ~ 1045239 (+)
trim101 NA coding upstream 1265428 984169 ~ 1010837 (+)
LOC120558777 LOC102225534,LOC103148188,LOC103148186,LOC103356007,LOC103385155 coding upstream 1289994 938976 ~ 986271 (+)
LOC120559387 NA coding downstream 136985 2413571 ~ 2420858 (+)
LOC120558519 NA coding downstream 272353 2548939 ~ 2550724 (+)
LOC120558523 NA coding downstream 369306 2645892 ~ 2647467 (+)
LOC120559413 NA coding downstream 384986 2661572 ~ 2662342 (+)
LOC120558526 NA coding downstream 476927 2753513 ~ 2757047 (+)
G46490 NA non-coding upstream 14155 2261791 ~ 2262110 (+)
G46488 NA non-coding upstream 20408 2255337 ~ 2255857 (+)
G46485 NA non-coding upstream 22524 2253086 ~ 2253741 (+)
LOC120559434 NA non-coding upstream 244192 2030045 ~ 2032073 (+)
LOC120559429 NA non-coding upstream 372887 1902564 ~ 1903378 (+)
LOC120559436 NA non-coding downstream 5538 2282124 ~ 2288627 (+)
G46501 NA non-coding downstream 25360 2301946 ~ 2302218 (+)
G46511 NA non-coding downstream 44751 2321337 ~ 2322029 (+)
G46523 NA non-coding downstream 67875 2344461 ~ 2347557 (+)
G46558 NA non-coding downstream 289138 2565724 ~ 2566315 (+)
LOC120559409 NA other upstream 43606 2205341 ~ 2232659 (+)
G46328 NA other upstream 638095 1635948 ~ 1638170 (+)
G46305 NA other upstream 753034 1522685 ~ 1523231 (+)
G46238 NA other upstream 991886 1277288 ~ 1284379 (+)
LOC120559832 rps21 other upstream 1028494 1236315 ~ 1247771 (+)
LOC120558501 NA other downstream 60750 2337336 ~ 2339429 (+)
G46530 NA other downstream 113360 2389946 ~ 2390512 (+)
G46574 NA other downstream 469312 2745898 ~ 2770453 (+)
LOC120559392 NA other downstream 869895 3146481 ~ 3288089 (+)
LOC120559414 NA other downstream 1002775 3279361 ~ 3304637 (+)

Expression



Co-expression Network