G46523


Basic Information

Item Value
gene id G46523
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 2344461 ~ 2347557 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU62293
ACACCATGAAGACTCCAGAGACTGTTGATATTCACTCCATGCAGatttatttgttacattttaacaaacaaaCCGAGCTGCCTCAGACACATCAACTGACCACCGGCGATAGTCAGTCGAATAGACAACTGAATCTAAGTTCCACATGACTCTCTTCTTATTCAGTGTTTAGGGTGGTGTCAGTTGGAAACATTCACAGCCACAGTTCCCTTATGTTCGTTACATCTTTAGATGGACCTGAACTggtgatatttttacttttaacagtCCTCTCATCTTCCTTTTCTTAAGTACACCTAGGTCGCTGTGACCCAGACAACAACTACTAACGTACATGCTAGTTCTCACAGATGGTTTACTTCAAATGATTTCACTTTATTTCATCCTGGAGGGTAGTCAGCATGTCCTGGTGTACCACATCGGTCACATCAAACGATTGtatttctttactttattaGCTTTTCCATGGTCTAATTAGTGGCAGAGGAGACATTATAAATGTCAAAAGACCTTAATCATTTTGGTGTCACTGATCATATTACCTTAGAATATAGCAATGCACAAGTGAGTTTTTATAGTTTCATATACAGATCATAATAGGTCCATCTCAGCTTTGCTTCAAAGAGAAAACTCCTCCGCTCTCTGACAGGAAACACCTTGCTAGGCTAACTTCCCTATGCTACCTCCCTCATATCTTCCTTGTTTAAACTAAAGATAGCTTTCAACctgcacttcctgtctccctgacacagagagaaaagtcTCCTCTCAGAGACTGCTGGGCCTAAATTGTGCTTAAACataatacacaaaataaaaaaattaatccaTTGTGCATTGAATAAACTCCCATGTTGATACATGATTAATAGTGAATCTTGCTAAACATACGTTACTTAGAAAGAAGTGAATATATGTGTAGGCCCTATAAAATATTGGGTGGTGACATTTGTCTGATTTCTTGATTATAATTGATTATAATGACAGAcattacaagacaaaacaatattaatagaacatttaaaataagagTGTACCTTTTCCTACCTCACATTTTTGTTTGacacttgagaagttttgcttggactTATAGGCACAAACGTTATTCCATGTCATCAGCCTCAGggtcagaagagtctccagtctggtcttcagtctctggttgtaaaagtggatgtgagttcctggctggttctggtcctccacagtcctctccatcagcttctgtttctatcggaccaacacatttatgtgttttgacatcagaacgccaggcaaatcttttgttacaaacactgcagctgaatcttttctctcctgtgtggactaccATGTGTAACCGTAAacttcctctctgtgtaaaatatttcttacagactgagcagctgaaaggtttttctccagaATGAGTCATCATGTGGGTCTTCAGGGTTCCACGTTGAGTGAAAGCtttaccacactcagagcagctaaaaggcttttcccctgtgtggattctcatgtgtatCTGTAAACTTCCACtatgtgtaaaatatttcttacagactgagcagctgaaaggtttttcaccTGTGTGAGTACTCATGTGTTTCTTCAGGGTTCCACTATCAGAGAAAGCTctaccacactcagagcagctgaaaggctttTCTCCTGTATGAGTCCTCATGTGTCTCTTAAGATCTGACTTGAAGCCAAATcttctcccacactcagagcagctgaatgttttgttacatcttgaatcatgtttcagagagtttaaagctgactgaggttctctggtctccttccaatcagcactgtcatcagtctcaggttcagaagagtctccagtctggtcttcagtctctggttgtaaatgtggatgtgagttcctggctggttctggtcctccacagtcctc

Function

GO: NA

KEGG:

id description
ko03013 Nucleocytoplasmic transport
ko03460 Fanconi anemia pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU62293 True 1906 lncRNA 0.40 2 2344461 2347557

Neighbor

gene id symbol gene type direction distance location
LOC120558473 LOC103372586 coding upstream 736016 1568295 ~ 1608445 (+)
adrm1 NA coding upstream 1291451 1048972 ~ 1053010 (+)
LOC120558589 LOC103356004 coding upstream 1299222 1015388 ~ 1045239 (+)
trim101 NA coding upstream 1333624 984169 ~ 1010837 (+)
LOC120558777 LOC102225534,LOC103148188,LOC103148186,LOC103356007,LOC103385155 coding upstream 1358190 938976 ~ 986271 (+)
LOC120559387 NA coding downstream 66014 2413571 ~ 2420858 (+)
LOC120558519 NA coding downstream 201382 2548939 ~ 2550724 (+)
LOC120558523 NA coding downstream 298335 2645892 ~ 2647467 (+)
LOC120559413 NA coding downstream 314015 2661572 ~ 2662342 (+)
LOC120558526 NA coding downstream 405956 2753513 ~ 2757047 (+)
G46511 NA non-coding upstream 22432 2321337 ~ 2322029 (+)
G46501 NA non-coding upstream 42243 2301946 ~ 2302218 (+)
LOC120559436 NA non-coding upstream 55834 2282124 ~ 2288627 (+)
G46492 NA non-coding upstream 67875 2276265 ~ 2276586 (+)
G46490 NA non-coding upstream 82351 2261791 ~ 2262110 (+)
G46558 NA non-coding downstream 218167 2565724 ~ 2566315 (+)
G46564 NA non-coding downstream 255641 2603198 ~ 2604255 (+)
LOC120559425 NA non-coding downstream 290407 2637964 ~ 2645754 (+)
G46577 NA non-coding downstream 316349 2663906 ~ 2861822 (+)
LOC120559439 NA non-coding downstream 508000 2855557 ~ 2856180 (+)
LOC120558501 NA other upstream 5032 2337336 ~ 2339429 (+)
LOC120559409 NA other upstream 111802 2205341 ~ 2232659 (+)
G46328 NA other upstream 706291 1635948 ~ 1638170 (+)
G46305 NA other upstream 821230 1522685 ~ 1523231 (+)
G46238 NA other upstream 1060082 1277288 ~ 1284379 (+)
G46530 NA other downstream 42389 2389946 ~ 2390512 (+)
G46574 NA other downstream 398341 2745898 ~ 2770453 (+)
LOC120559392 NA other downstream 798924 3146481 ~ 3288089 (+)
LOC120559414 NA other downstream 931804 3279361 ~ 3304637 (+)
LOC120559404 NA other downstream 1100547 3448104 ~ 3514758 (+)

Expression


Co-expression Network