G46558


Basic Information

Item Value
gene id G46558
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 2565724 ~ 2566315 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU62353
GCTTTGGAATAACCATACCATCAGGCCTGTCCGTCAGTCTCTCTGTCCATCTGGGAAACCGGAGACCATGTACCACCTGCCTCACAGGTTTGGTGGAAGGGATTGTGGATTCCCAGTGGATCCCCAAGTGTTACAGGAGTTCAAAGACCTTCTGCCACCCACGAACAGTTTGTGTGGAGATGCTAACCTCCAAGCATATTTTACCAACTTGGAGAGACAGAGCCAGCTCGCTCCACCCATAAACTGGCCAGCTGCTGTTGACAACTACATTAGACTTAAGGAAATGGCTGgtctttgagagagagagagagagagagagagagagagagacagacacacacagacagacacacacagacagacacacacagacagacacacacagacacacacacagacagacagacacacacagacagac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU62353 True 421 lncRNA 0.50 2 2565724 2566315

Neighbor

gene id symbol gene type direction distance location
LOC120558519 NA coding upstream 15000 2548939 ~ 2550724 (+)
LOC120559387 NA coding upstream 144866 2413571 ~ 2420858 (+)
LOC120558473 LOC103372586 coding upstream 957279 1568295 ~ 1608445 (+)
adrm1 NA coding upstream 1512714 1048972 ~ 1053010 (+)
LOC120558589 LOC103356004 coding upstream 1520485 1015388 ~ 1045239 (+)
LOC120558523 NA coding downstream 79577 2645892 ~ 2647467 (+)
LOC120559413 NA coding downstream 95257 2661572 ~ 2662342 (+)
LOC120558526 NA coding downstream 187198 2753513 ~ 2757047 (+)
LOC120558536 NA coding downstream 258942 2825257 ~ 2826712 (+)
LOC120559389 NA coding downstream 611982 3178297 ~ 3185180 (+)
G46523 NA non-coding upstream 218167 2344461 ~ 2347557 (+)
G46511 NA non-coding upstream 243695 2321337 ~ 2322029 (+)
G46501 NA non-coding upstream 263506 2301946 ~ 2302218 (+)
LOC120559436 NA non-coding upstream 277097 2282124 ~ 2288627 (+)
G46492 NA non-coding upstream 289138 2276265 ~ 2276586 (+)
G46564 NA non-coding downstream 36883 2603198 ~ 2604255 (+)
LOC120559425 NA non-coding downstream 71649 2637964 ~ 2645754 (+)
G46577 NA non-coding downstream 97591 2663906 ~ 2861822 (+)
LOC120559439 NA non-coding downstream 289242 2855557 ~ 2856180 (+)
LOC120559432 NA non-coding downstream 312847 2879162 ~ 2879742 (+)
G46530 NA other upstream 175212 2389946 ~ 2390512 (+)
LOC120558501 NA other upstream 226295 2337336 ~ 2339429 (+)
LOC120559409 NA other upstream 333065 2205341 ~ 2232659 (+)
G46328 NA other upstream 927554 1635948 ~ 1638170 (+)
G46305 NA other upstream 1042493 1522685 ~ 1523231 (+)
G46574 NA other downstream 179583 2745898 ~ 2770453 (+)
LOC120559392 NA other downstream 580166 3146481 ~ 3288089 (+)
LOC120559414 NA other downstream 713046 3279361 ~ 3304637 (+)
LOC120559404 NA other downstream 881789 3448104 ~ 3514758 (+)
gpr173 LOC104932793,LOC101475032,LOC100694027,LOC104957049 other downstream 1276749 3843064 ~ 3865798 (+)

Expression


Co-expression Network