G46996


Basic Information

Item Value
gene id G46996
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 3867151 ~ 3870238 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU62873
AGCAGAATATGGCAAACTCCAGCCCATCAAGCTGCATCAGATGGCCACACTGACCTGAATGGAACACTACTCTGTAATACTAACACAATGTAGGAGTCCCACCTTTGGAAAGGTTAACTAAACATCCCATATTTCATCCATTCATACGTCAGCCGTATGCTCAGCTAGACCGTGGTGTCTGAGGCTGGTTACCGGGGGAACTCACATTGGCAGTACATGCACAGAACTTCAGTCCGGTGGAGAGAGCCATCTGGAAGGTTTGTCAACTTTGTTTTCGGCTAGCCGTCCACAACATTACCGCTGCATCGCTTCCTGATTTCACAAACTACGGAGCTGGCCCGAGACCCAAATCACAGCGCACACGCAAGTTAATCACACGTCAAAAAAGTTAATGGCGGAAGGAATAGGAAGCGTGAACTcgccacagacagacacatgacCTTTTCTCGGCTCAGATATCGTTATGcgctctgtctgtttctgtcagAACAGCTTGCGTTTCTGAAGCATGAAATTCACTTGTGAATGTATGGAAATGCCTATTTGCTGAAAATTTGAATCATTTGTTATTGACTTTGTCCTTTATGTGCAAACCGCAAAgctagtttttgttgtttgttttgtctagGAAGGAATGCTACCGTTTTCCTTCTACTGTTAGTACCAAATATCAGACATCATTAAAACCAGTGAAGTACAGCCGCAGCTGTGTAATGGTTACCACATTGATCATCTcacctgaaaacatgttttatttgggCTTGTaattcacaaaaaaatgttggcaAAGCAGTTTAGCAGTTTGTCTTCCTCAGAGGAGGGTTACATAAAGCTGGATGCTGACACAGCGGAAACACAAGCAGCCCTATTCCTGTAAATCGTAGTGACAAAGATGATACTCAGCACAGAGGAACTATCAAGTGCTAAATGAGGGAGTGACAAAGCCTGGGCGGTTTCTAAATGTCCATAGGAGTGTAATCCCAACTGCTATTGTTACTGTTATTGAAACTACCCTTTGGAaatcagagacagacagacagacagacagaccagactgatctcaagaactggcgtatgtatgacaccccaattcgtatgccattctggcgtgttatcaagacgcttctcagcgtgtttatcaacgccgtttggcctccattgacttacatttcCTTGCGATTGCATGCCaatttacgccgtagcgagtagtatgaaagcccgaaaatccgcatagggaggttggtcgggggggggggatgggtcaaacaacacaggactttgtcaaacaacacaggactttcacccaggagaccggggatcgtgttacgcgtgtcacgtttcctaaacccagccgtcccgttcttctttacctaaacccaacccgttcgCCCTGATGCTAATTCCTCAATATAGATAGCGTAGGATCCCAAAATGGTGGGCGGACTCAGACACCTCCCAAATCGTCACGTGACCGCAAGCTACCATGACGTACTGTATGTCCTCATTCTCAGtacggcgtagacatacacgcggatagctcaaaatgcgtacagataacacgccactttgctttagaaagtggcgtgtatgtttacgccaagtcatgatgtcacgttggacagacagagagagacagacacacagacaaacagacagttaGTGCCACCAAAGACTCCGTGATCATGATtacggtttaaagaaatacaaacaacccaCAGTGTTTATGTCAAAAGTATGACATAAATCCAAACTGATTACTGATCAGATCTTAGGGACATAGCATCCCTGAGGTGCTCCAGCAGCTATCATTTCATCTTGTGTCATCGCGAGGTAAACAGTACAACTACGCTGGTCACGGGCCGAGATGGCTGGCTCCCAAATCTTTTACCAGCTCCTAAGATTACATATATGGATATTGTTTGACGGTACAGTAGAGCCAAGGTGAAATTAGACACCAATCATCAGGACTTCACACAGAGTACCGCAGGTATGTGAGGATGCAGTAGAAGGCACATTCACTGCTTTATATTTGCATAAATCTAAAACTCAATTAACTGTGCTTCTTTCTTGTTTCTCTCTGAAAATGAACTGTAACTTGAAGTAGAGTTCAGGTGGAAGTAAAGAGCAGGGCACAGAGATTGTAACTTGTCAGTGAATGTCCGAAAACATGACAGTCTTTAAGATTGAGGGTAGATAGTGTGTTTGGGGGGTTTGAGGTGCCCCGTTGTCTCTGCCGTGGCACTTCTGACAACACCCGACAACAGCATGCCACAGAGAATCGCtaatcttgtttttattttcagaattaTGGCCTTACTCCATAAAAACGTCAAACCAATGCAACAAAGTTGTAGACAAATGTGTCTCTTCTGTTTGCACTGAAGTCACGCAAAAGGAGCAAACGGAAGACTGTACGTACACTAGTGACATTTGGAAGACTTGTTGCTCGTCCCATAAAAACCTGGGGGAACTGTGGTCATGGACACATGATGGGAGGGGGGAGAAAAGGACAACGTTCAAAGTAGTAGAAGTGACTTTTCTATTGCAGACGGATGATCGGAGTGAACCCTACGCTGGATTCCCGTGGGATTGTTTTTCCTCTCGGAAATTAACCTGAGGGATGATGGGAAAACCACTGCTCTTTCATTGTCATCTCTGAGACTGAGCCAGAGGAACGTGTGGATTCACAGTTGATGCTGGAGAGGCCTGACAGTGCTTTTTTTAGTTGCCTCGGGCAGAGTATCTTTTGTAAATGTACTGTGACCTCTGTACTATTTAGTGTGTATTATATTGACAGCAAACCAACTTTGAAATGCAACCGAAGAGTTCCTGATCCTCCtatttttactgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtttctatcgGCAGgtatgattttgtgtgtgtgtgtgcagatgatgGTTACTTGGATGAAACAGGAAGGTGAGAAGGAAAATACTGACCAGATACATATTGCATTTTGAAGATGTCATTCCTGCAAATGCTTCCtcagtattctttttttttttaattattattattttttgggcattttaggcctttgttTTGACAGGAcgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU62873 True 3088 lncRNA 0.44 1 3867151 3870238

Neighbor

gene id symbol gene type direction distance location
LOC120559447 lactbl1,LOC103362248,LOC100707689,LOC101473793,LOC102312186 coding upstream 132760 3725961 ~ 3734391 (+)
LOC120559389 NA coding upstream 681971 3178297 ~ 3185180 (+)
LOC120558536 NA coding upstream 1040439 2825257 ~ 2826712 (+)
LOC120558526 NA coding upstream 1110104 2753513 ~ 2757047 (+)
LOC120559413 NA coding upstream 1204809 2661572 ~ 2662342 (+)
LOC120558400 NA coding downstream 88318 3958556 ~ 3982281 (+)
LOC120558402 LOC103357835,LOC104954328 coding downstream 135027 4005265 ~ 4014601 (+)
mfn2 mfn2 coding downstream 160285 4030523 ~ 4059713 (+)
LOC120559787 LOC103357833 coding downstream 214456 4084694 ~ 4180336 (+)
LOC120558381 LOC100699862,LOC103374679,LOC104941073 coding downstream 384402 4254640 ~ 4258571 (+)
LOC120559446 NA non-coding upstream 147996 3706605 ~ 3719155 (+)
LOC120559445 NA non-coding upstream 205224 3660590 ~ 3661927 (+)
G46555 LOC104948352 non-coding upstream 613620 3041473 ~ 3253531 (+)
LOC120559441 NA non-coding upstream 831216 3018811 ~ 3035935 (+)
LOC120559422 NA non-coding upstream 889457 2976616 ~ 2977694 (+)
G46997 NA non-coding downstream 137 3870375 ~ 3872139 (+)
G47006 NA non-coding downstream 8554 3878792 ~ 3881000 (+)
LOC120559454 NA non-coding downstream 50340 3920578 ~ 3925865 (+)
G47045 NA non-coding downstream 64091 3934329 ~ 3935590 (+)
G47062 NA non-coding downstream 144954 4015192 ~ 4019079 (+)
gpr173 LOC104932793,LOC101475032,LOC100694027,LOC104957049 other upstream 1353 3843064 ~ 3865798 (+)
LOC120559404 NA other upstream 352393 3448104 ~ 3514758 (+)
LOC120559414 NA other upstream 562514 3279361 ~ 3304637 (+)
LOC120559392 NA other upstream 579062 3146481 ~ 3288089 (+)
G46574 NA other upstream 1096698 2745898 ~ 2770453 (+)
LOC120559501 NA other downstream 902694 4772932 ~ 4775358 (+)
G47444 NA other downstream 2328808 6199046 ~ 6200594 (+)
ccm2l ccm2l,LOC102778549 other downstream 2827755 6697993 ~ 6720932 (+)
G47903 LOC104965021 other downstream 4242203 8112441 ~ 8116228 (+)
pkig pkig other downstream 4472512 8342750 ~ 8380578 (+)

Expression


Co-expression Network