G47076


Basic Information

Item Value
gene id G47076
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 4055674 ~ 4055963 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU62974
ctttttttttttttttttttttttttttttttttttttttttttttctacgaccctgttcttcttttcctaaacccgacccctgttcttcttttcctaaacccgaccctgttcttcttttcctaaacccgaccctgttcttcttttcctaaacccgaccccgttcttcttttcctaaacccgacccgcatgtcacgtttcctaaacccaaccgtagctgTAGAGAGCGTAGACATGCACGTGGATATACGGtactcaaaatgcgt

Function

GO: NA

KEGG:

id description
ko04512 ECM-receptor interaction
ko04510 Focal adhesion
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU62974 True 265 lncRNA 0.40 2 4055674 4055963

Neighbor

gene id symbol gene type direction distance location
LOC120558402 LOC103357835,LOC104954328 coding upstream 41073 4005265 ~ 4014601 (+)
LOC120558400 NA coding upstream 73393 3958556 ~ 3982281 (+)
LOC120559447 lactbl1,LOC103362248,LOC100707689,LOC101473793,LOC102312186 coding upstream 321283 3725961 ~ 3734391 (+)
LOC120559389 NA coding upstream 870494 3178297 ~ 3185180 (+)
LOC120558536 NA coding upstream 1228962 2825257 ~ 2826712 (+)
LOC120559787 LOC103357833 coding downstream 28731 4084694 ~ 4180336 (+)
LOC120558381 LOC100699862,LOC103374679,LOC104941073 coding downstream 198677 4254640 ~ 4258571 (+)
LOC120559099 NA coding downstream 210912 4266875 ~ 4281526 (+)
LOC120558632 LOC101473708,LOC108431628,LOC107592856 coding downstream 375425 4431388 ~ 4587064 (+)
LOC120558307 NA coding downstream 1320340 5376303 ~ 5387260 (+)
G47062 NA non-coding upstream 36595 4015192 ~ 4019079 (+)
G47045 NA non-coding upstream 120084 3934329 ~ 3935590 (+)
LOC120559454 NA non-coding upstream 129809 3920578 ~ 3925865 (+)
G47006 NA non-coding upstream 174674 3878792 ~ 3881000 (+)
G46997 NA non-coding upstream 183535 3870375 ~ 3872139 (+)
G47113 NA non-coding downstream 18065 4074028 ~ 4074900 (+)
LOC120558383 NA non-coding downstream 202856 4258819 ~ 4264632 (+)
LOC120558318 NA non-coding downstream 603503 4659466 ~ 4666871 (+)
LOC120559518 NA non-coding downstream 706426 4762389 ~ 4766774 (+)
LOC120559496 NA non-coding downstream 713317 4769280 ~ 4772306 (+)
gpr173 LOC104932793,LOC101475032,LOC100694027,LOC104957049 other upstream 189876 3843064 ~ 3865798 (+)
LOC120559404 NA other upstream 540916 3448104 ~ 3514758 (+)
LOC120559414 NA other upstream 751037 3279361 ~ 3304637 (+)
LOC120559392 NA other upstream 767585 3146481 ~ 3288089 (+)
G46574 NA other upstream 1285221 2745898 ~ 2770453 (+)
LOC120559501 NA other downstream 716969 4772932 ~ 4775358 (+)
G47444 NA other downstream 2143083 6199046 ~ 6200594 (+)
ccm2l ccm2l,LOC102778549 other downstream 2642030 6697993 ~ 6720932 (+)
G47903 LOC104965021 other downstream 4056478 8112441 ~ 8116228 (+)
pkig pkig other downstream 4286787 8342750 ~ 8380578 (+)

Expression


Co-expression Network