Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120559501 |
| gene name | NA |
| gene type | misc |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053116.1 |
| NCBI id | CM020913.1 |
| chromosome length | 44101041 |
| location | 4772932 ~ 4775358 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU63204 | False | 481 | lncRNA | 0.40 | 4 | 4773967 | 4774785 |
| XM_039801219.1 | True | 766 | mRNA | 0.45 | 11 | 4772932 | 4775358 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120558632 | LOC101473708,LOC108431628,LOC107592856 | coding | upstream | 185868 | 4431388 ~ 4587064 (+) |
| LOC120559099 | NA | coding | upstream | 491406 | 4266875 ~ 4281526 (+) |
| LOC120558381 | LOC100699862,LOC103374679,LOC104941073 | coding | upstream | 514361 | 4254640 ~ 4258571 (+) |
| LOC120559787 | LOC103357833 | coding | upstream | 592596 | 4084694 ~ 4180336 (+) |
| mfn2 | mfn2 | coding | upstream | 713219 | 4030523 ~ 4059713 (+) |
| LOC120558307 | NA | coding | downstream | 600945 | 5376303 ~ 5387260 (+) |
| npbwr2b | LOC103358254,LOC104941021 | coding | downstream | 971851 | 5747209 ~ 5750232 (+) |
| oprl1 | oprl1 | coding | downstream | 1288492 | 6063850 ~ 6234843 (+) |
| LOC120559680 | fam187b,LOC104965325,LOC102795245 | coding | downstream | 1486665 | 6262023 ~ 6272680 (+) |
| rgs19 | LOC103373111 | coding | downstream | 1570750 | 6346108 ~ 6393502 (+) |
| LOC120559496 | NA | non-coding | upstream | 626 | 4769280 ~ 4772306 (+) |
| LOC120559518 | NA | non-coding | upstream | 6158 | 4762389 ~ 4766774 (+) |
| LOC120558318 | NA | non-coding | upstream | 106061 | 4659466 ~ 4666871 (+) |
| LOC120558383 | NA | non-coding | upstream | 508300 | 4258819 ~ 4264632 (+) |
| G47113 | NA | non-coding | upstream | 698032 | 4074028 ~ 4074900 (+) |
| G47276 | NA | non-coding | downstream | 2759 | 4778117 ~ 4778555 (+) |
| LOC120559638 | NA | non-coding | downstream | 82910 | 4858268 ~ 4858785 (+) |
| G47307 | NA | non-coding | downstream | 128791 | 4904149 ~ 4920830 (+) |
| G47308 | NA | non-coding | downstream | 129138 | 4904496 ~ 4914494 (+) |
| G47310 | NA | non-coding | downstream | 193571 | 4968929 ~ 4969299 (+) |
| gpr173 | LOC104932793,LOC101475032,LOC100694027,LOC104957049 | other | upstream | 907134 | 3843064 ~ 3865798 (+) |
| LOC120559404 | NA | other | upstream | 1258174 | 3448104 ~ 3514758 (+) |
| LOC120559414 | NA | other | upstream | 1468295 | 3279361 ~ 3304637 (+) |
| LOC120559392 | NA | other | upstream | 1484843 | 3146481 ~ 3288089 (+) |
| G46574 | NA | other | upstream | 2002479 | 2745898 ~ 2770453 (+) |
| G47444 | NA | other | downstream | 1423688 | 6199046 ~ 6200594 (+) |
| ccm2l | ccm2l,LOC102778549 | other | downstream | 1922635 | 6697993 ~ 6720932 (+) |
| G47903 | LOC104965021 | other | downstream | 3337083 | 8112441 ~ 8116228 (+) |
| pkig | pkig | other | downstream | 3567392 | 8342750 ~ 8380578 (+) |
| LOC120559763 | NA | other | downstream | 3702765 | 8478123 ~ 8497394 (+) |
