G47310


Basic Information

Item Value
gene id G47310
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 4968929 ~ 4969299 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU63252
gtttttcttttaacaacttttcatctttaacatcttaagatggcacagaccgagtttgaagttgatcagatgaaatctctaggaggagttcgttaaagtacgacatgtggaaatggccaaaattgcactaatttcgaactttcaattcaaaatggcggacttaacccttgtgttgtccttcgggtcccagtgacccgaaggacaacacaaggattatgtacttccgtttactttgtttagaattgctctctaaacaagggttaatacagcaccttagttcttgtttgtacagcattttggtcagcttaaactgtgtttaaatgtattctagaaataaactttacttacttactttacaagaaacagggttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU63252 True 371 lncRNA 0.36 1 4968929 4969299

Neighbor

gene id symbol gene type direction distance location
LOC120558632 LOC101473708,LOC108431628,LOC107592856 coding upstream 381865 4431388 ~ 4587064 (+)
LOC120559099 NA coding upstream 687403 4266875 ~ 4281526 (+)
LOC120558381 LOC100699862,LOC103374679,LOC104941073 coding upstream 710358 4254640 ~ 4258571 (+)
LOC120559787 LOC103357833 coding upstream 788593 4084694 ~ 4180336 (+)
mfn2 mfn2 coding upstream 909216 4030523 ~ 4059713 (+)
LOC120558307 NA coding downstream 407004 5376303 ~ 5387260 (+)
npbwr2b LOC103358254,LOC104941021 coding downstream 777910 5747209 ~ 5750232 (+)
oprl1 oprl1 coding downstream 1094551 6063850 ~ 6234843 (+)
LOC120559680 fam187b,LOC104965325,LOC102795245 coding downstream 1292724 6262023 ~ 6272680 (+)
rgs19 LOC103373111 coding downstream 1376809 6346108 ~ 6393502 (+)
G47307 NA non-coding upstream 48099 4904149 ~ 4920830 (+)
G47308 NA non-coding upstream 54435 4904496 ~ 4914494 (+)
LOC120559638 NA non-coding upstream 110144 4858268 ~ 4858785 (+)
G47276 NA non-coding upstream 190374 4778117 ~ 4778555 (+)
LOC120559496 NA non-coding upstream 196623 4769280 ~ 4772306 (+)
G47314 NA non-coding downstream 16982 4986281 ~ 4986779 (+)
G47369 NA non-coding downstream 386336 5355635 ~ 5356111 (+)
G47385 NA non-coding downstream 553771 5523070 ~ 5523975 (+)
G47388 NA non-coding downstream 563702 5533001 ~ 5534512 (+)
G47393 NA non-coding downstream 629013 5598312 ~ 5598572 (+)
LOC120559501 NA other upstream 193571 4772932 ~ 4775358 (+)
gpr173 LOC104932793,LOC101475032,LOC100694027,LOC104957049 other upstream 1103131 3843064 ~ 3865798 (+)
LOC120559404 NA other upstream 1454171 3448104 ~ 3514758 (+)
LOC120559414 NA other upstream 1664292 3279361 ~ 3304637 (+)
LOC120559392 NA other upstream 1680840 3146481 ~ 3288089 (+)
G47444 NA other downstream 1229747 6199046 ~ 6200594 (+)
ccm2l ccm2l,LOC102778549 other downstream 1728694 6697993 ~ 6720932 (+)
G47903 LOC104965021 other downstream 3143142 8112441 ~ 8116228 (+)
pkig pkig other downstream 3373451 8342750 ~ 8380578 (+)
LOC120559763 NA other downstream 3508824 8478123 ~ 8497394 (+)

Expression


Co-expression Network